Xenopus laevis (African clawed frog): 398325
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Entry
398325 CDS
T01010
Symbol
gtf2f1.L, gtf2f1, rap74
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
398325 (gtf2f1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
398325 (gtf2f1.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
398325 (gtf2f1.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
398325
NCBI-ProteinID:
NP_001082258
Xenbase:
XB-GENE-974839
UniProt:
Q04870
A0A974DEV9
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Position
3L:150459290..150479444
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AA seq
524 aa
AA seq
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MASLGTSGQSVTEYVVRVPRNPSKRYSLMAFNAADKVDFSTWNQARMERDLSAKKMYQEE
EMPESGAGSEYNRKQREESRRKKYGIILREFKVDDQPWILRVNGKAGRKYKGVKKGGVTE
NASYFIFTQCADGAFEAFPVSNWYNFTPVAKHRTLTAEEAEQEWERRNKVLNHFTIMQQR
RLKDQVGDEDEDEEGGGKLEKGGKGKKKKKKSDLKIHDLEDDLELSSTESENSDEEGESR
KKPQKKVPAKGGKKKKRKSDDEALEDSDDGDFEGQEVDYMSDESSSDEELPGKIKPAKEE
EGPKGLDEQSESSEESEEEKAEEEEGEEEKKAPTPQDNKKKKKGDSSDESETSEDSDIDG
ASSSLFMQKKKTPPKKDKKGGSNSSSRGNSRPGTPSPDTGNTSSTLRAAASKLEQSKRGT
VSNTPAAKRLKMEAGPQNTSGKSTPQPQSGKSTPSSGDIQLTEEAVRRYLTRKPMTTKDL
LKKFQTKKTGLSSEQTVNVLAQILKRLNPDRKVVHDKMHFYLKE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctgggcaccagcggtcagtctgttacagagtatgttgtgcgtgtccccagg
aacccgagtaagagatacagtctcatggcatttaatgctgctgacaaagtggatttctcc
acgtggaaccaggctcgcatggaacgcgacctgagtgccaaaaagatgtatcaggaagag
gagatgccggaatctggggctggcagcgagtataaccgcaaacagagggaggaatccagg
aggaagaaatatgggataattttaagagagttcaaagtagacgaccagccctggattctg
agggtgaatggcaaggcaggacgcaagtataaaggtgtgaagaagggtggagtgacggaa
aatgcctcttacttcatcttcacacagtgcgcagatggagcatttgaagcatttccagtc
tccaactggtataatttcactccagttgccaaacatcgcacgctgacagctgaggaggcc
gagcaggagtgggaaagacgtaacaaagtactcaatcatttcaccattatgcagcagcgt
cgcctgaaggaccaggtgggagatgaagatgaagacgaggaaggtggaggaaaattggaa
aaaggaggaaaaggcaagaaaaagaagaaaaaaagtgaccttaaaatccacgatctagag
gatgaccttgaattgagctccactgaaagcgagaacagtgatgaggagggagagagtcgc
aaaaaaccccaaaagaaagttccggccaagggggggaagaagaagaagcggaagtctgac
gacgaggctctggaggacagtgatgatggggactttgagggacaggaagtagattacatg
tccgacgagagcagctctgatgaagagttgccagggaagatcaaacctgccaaagaggag
gaaggccctaaaggattagatgagcagagtgagagcagtgaggagagcgaggaggaaaag
gctgaggaagaagaaggagaagaagagaagaaggcccccaccccgcaagataataagaaa
aagaagaaaggagacagcagtgatgaatcggagacatctgaggacagcgatattgatgga
gcttcatcgtccctctttatgcagaaaaagaagaccccgcccaagaaggataagaaaggg
ggctccaacagcagctctagagggaacagcagaccaggaaccccatctccagacacagga
aacacatccagcaccctgagagctgcagcaagtaaactagaacaaagcaaacgaggaaca
gtctcgaacactcctgcggcgaaacgtctcaagatggaagctgggccgcagaacacttct
ggcaaatccacccctcagccacagtctgggaagtctacccccagcagcggggacattcag
ttgacagaggaagctgttcgccggtacttgacccgcaagcccatgacaactaaagacctt
ctgaagaaattccaaaccaaaaagacaggtctgagcagtgagcaaacagtgaatgtgctg
gcccagatcctaaagagactgaacccagaccggaaggttgtgcacgacaagatgcacttt
taccttaaggagtga
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