Xenopus laevis (African clawed frog): 398448
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Entry
398448 CDS
T01010
Symbol
tra2b.S, sfrs10, tra2b
Name
(RefSeq) splicing factor, arginine/serine-rich 10
KO
K12897
transformer-2 protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
398448 (tra2b.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
398448 (tra2b.S)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
398448 (tra2b.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
398448 (tra2b.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
398448 (tra2b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
398448
NCBI-ProteinID:
NP_001082402
Xenbase:
XB-GENE-17332898
UniProt:
Q2VPF1
LinkDB
All DBs
Position
9_10S:82844583..82863498
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AA seq
298 aa
AA seq
DB search
MSDSGEQNYVDRESRSASRSGSARQSGKSASPSPNRSAARSRSKEGSRRSKSKSRSRSHS
RSRSRRGSRRHYTRSRTRSRSRKRSRSRSHSREYRRRHSHSHSPMSSRRRHIGNRANPDP
NCCLGVFGLSLYTTERDLREVFSKYGPLSDVSIVYDQQSRRSRGFSFVYFENVDDAKEAK
ERANGMELDGRRLRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDSYDRGYDRGGYDDRDY
YSRSYRGGGGGGGGGGGGGWRGGQDRDQFSRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagcggagagcaaaattatgtcgatcgggaatcaagatctgcgtcacggagt
ggaagtgcacgacagtctggcaagtctgcaagtccgtccccgaatcgctcagctgcccga
tctcgttcaaaagagggatccagacgttccaaatcaaaatcccgatccagatctcattca
aggtctagatcaagaagaggttctcgaagacattatacaaggtcacgcactcgctctagg
tctcggaaaagatcaaggagccggtcacacagtagagaatatagaaggcgtcacagccat
agtcactctcctatgtcttctcggcgaaggcatattggaaaccgggcaaatccagatcct
aactgctgtttgggagtatttggtttgagtctatatactacagaacgtgatctgagagaa
gtcttttctaaatacggtccacttagtgacgtttccatagtgtatgaccagcagtcaaga
cgttcaagaggattctcttttgtatattttgaaaatgttgatgatgcgaaagaggcaaaa
gaacgtgctaatggcatggaacttgatggacgacggctacgtgttgatttctcaataaca
aaacggccccatacacctacaccaggaatctacatgggaagaccaacatatggcagttca
cggcgcagagattcttacgatcggggatacgaccgagggggatatgacgacagagactac
tacagcagatcctacagagggggaggaggtggtggtggtggaggaggaggaggaggatgg
cgtggaggacaagacagagaccagttttctaggaggaggtctccttctccatattatagc
cgcggtggctacagatctcgctctagatcacgttcatactctccacgtcgctattga
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