Xenopus laevis (African clawed frog): 398530
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Entry
398530 CDS
T01010
Symbol
usp1.L
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
398530 (usp1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
398530 (usp1.L)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
398530 (usp1.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
398530 (usp1.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
398530 (usp1.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
398530 (usp1.L)
Ubiquitin system [BR:
xla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
398530 (usp1.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
398530 (usp1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
398530
NCBI-ProteinID:
XP_018113615
Xenbase:
XB-GENE-17342357
UniProt:
A0A1L8GLJ6
A0A974HNS5
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All DBs
Position
4L:70958656..70983136
Genome browser
AA seq
780 aa
AA seq
DB search
MPGVTHCESQTVLSKSSPPRRNRLSLRFFQKKDTKRALEFTEASPATTESQNDEEKESEI
CSDQVVPTPQLSPPACCVKKESLIPFVGLNNLGNTCYLNSILQVLCYCPGFKNGIKFLSE
IISKKVENVGKEREQTQDKDTVKHELPASYEVISSLSSLIHSMEHLQISFLSNPDNYDSE
LAAQPRRLLNTLREVNPMYEGYLQHDAQEVLQCILGNIQEACQVMKKEILLNSQINNSTK
NAQDTATSKTEHNGLHGSDTEFLTGSSAEITEIETNENGKRKSDNEAGNVKKRTKLTKEP
SAEEQRQTRSKRKSLTEKQDKRTDAPPKADNGNSNHSQKKTKLGLNWLKSSKQPSIFSKF
CSLGKQSDSSSKSSETGTHSIKTNAKTSENEQSKENGLCILENNKNREDTKTIPGNESSG
FELVEKMFQGKLVLRTRCLECESFTERREDFQDISVPVLESEPPKLEDSSDVSPDPRLET
KTLKWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKIPDIVTIHLKCFSANNSEF
DCFGGLSKVNTALLTPLKLSLEEWSTNESKDLYGLFAVVMHSGVTISSGHYTAYVRIPEI
SDLERDHMKALVDHKDAVKAEPLNEEEARMNDANYDDGEVSFRVNGCVPSASKVSKKQTE
TVSLLGGQKSKPDFQQLPNKTAKSETSFNSHGDKSYSASLSVDLQREMSEERDLSVSSYT
CKADNLTSSFLESLKEYLGKWLLFDDSEVKVTDEKDFMTAISPNTLSTSTPYLLFYKKLI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgccaggagtcactcactgtgaaagccaaacggtcctatccaaaagcagtcctccaaga
aggaaccgcttatctttacgcttttttcagaagaaagacaccaagagggcactggaattt
actgaggcatcgccagcaacaacagaaagtcaaaatgacgaggaaaaggaatccgaaatc
tgcagtgatcaagttgttccaactcctcagttatcaccaccagcttgctgtgtaaaaaaa
gaaagtcttattccatttgttggattgaataatcttggtaatacctgctacctcaacagc
atacttcaggtactatgctattgtcctggatttaaaaatgggataaagtttctgtctgag
atcatttctaagaaggtggaaaatgttggtaaagagagagagcagactcaggataaggac
actgtaaaacatgagttacctgcaagttatgaggtcatcagcagtttgagttctttgatt
cactctatggaacaccttcagatatcttttctctcaaacccagacaattatgattctgaa
cttgctgctcaaccaaggaggcttcttaatacattgagggaggtaaatcctatgtacgaa
ggatatctacagcatgatgcacaagaagttttgcagtgtattcttggaaatattcaagag
gcatgtcaggttatgaaaaaggaaattcttttaaactcacagattaataattccactaag
aatgcacaggacactgctacatcaaaaactgagcacaatggattacatggtagtgacaca
gagtttttaactggcagctctgctgaaataactgaaattgagacgaatgaaaatggcaaa
aggaaaagtgataatgaggctggaaatgtaaaaaaaagaaccaagctaaccaaagaacca
tccgcagaagaacagagacaaaccagatcaaaaaggaagtcattaacagaaaaacaagat
aaaagaactgatgccccccctaaggctgacaatgggaattcaaatcattcacagaaaaaa
acaaagctagggttaaactggctaaaatcgagtaaacaacctagcatattttctaagttt
tgtagcctgggtaaacagtcagactcttcatccaaaagctctgaaactggaacacacagc
ataaaaaccaacgctaaaacatctgaaaatgaacagtctaaagaaaatggcctctgcatc
ttggagaacaacaaaaacagagaagatacaaaaactattccaggaaatgaatcgagtggt
tttgaattagtagaaaaaatgttccaaggcaagctggtgttgcgaacccgctgtcttgaa
tgtgagtctttcacagagaggagggaagattttcaggatatcagcgtgcctgttctggaa
agcgaaccaccaaaactggaggactcctctgatgtttctcccgatccaagacttgaaaca
aagactttaaaatgggctatatcccagtttgcatcagtagagagaattgttggagaggac
aaatatttctgtgaaaactgtcatcattacaccgaagctgaaagaagccttctttttgac
aaaattccagacattgtgactattcatctaaaatgcttttctgcaaataactctgaattt
gattgctttggtggtctttccaaagtaaacacagcattgttgactccgctgaaattgtct
cttgaggaatggagtacaaatgaaagcaaggacctttatgggctgtttgcagtggtaatg
cacagtggggttactataagcagtggacactatacagcttatgttcgaattccagagata
agcgatcttgaaagagaccatatgaaagccctggttgaccacaaggatgctgtaaaggcc
gagccattaaacgaagaagaggcacggatgaatgatgccaattatgatgatggtgaggtc
tcgtttcgagtgaatgggtgtgtaccatcagctagtaaagtgagcaaaaagcaaacagaa
accgtaagccttttaggaggacagaaaagtaaacctgactttcagcagttacccaacaaa
actgctaaatccgaaaccagcttcaactcccatggtgataaaagttatagtgcgagcctt
agtgtagaccttcagcgggagatgtcagaagagagggacttgagcgtgtcctcctatacc
tgcaaagctgacaatttgacatcttcctttttggaaagcctgaaggagtatttaggaaaa
tggcttctttttgacgattcagaagtaaaagttacagacgaaaaagatttcatgactgct
atttccccaaacacactttcaacgtccactccttatttactcttctacaagaaattaatt
taa
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