Xenopus laevis (African clawed frog): 443754
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Entry
443754 CDS
T01010
Symbol
gtf2h2.S, gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 S homeolog
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
443754 (gtf2h2.S)
09124 Replication and repair
03420 Nucleotide excision repair
443754 (gtf2h2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
443754 (gtf2h2.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
443754 (gtf2h2.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
443754 (gtf2h2.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
443754 (gtf2h2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Matrix
IBR
Motif
Other DBs
NCBI-GeneID:
443754
NCBI-ProteinID:
NP_001085329
Xenbase:
XB-GENE-6251885
UniProt:
Q6GR42
LinkDB
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Position
1S:170655510..170674850
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AA seq
395 aa
AA seq
DB search
MDEEPEKTKRWEGGYERTWEVLKEDESGSLKATIDEILFKDKRKRIFENRGQVRLGMMRH
LYVIVDSSRTMEDQDLKPNRLTCTLKLLEFFVEEYFDQNPISQIGLIVTRNKRAEKLTEL
AGNPRQHINAMKKAVDMTCSGEPSLYNSLNLALQTLKHMPGHTSREILVIFSSLTTCDPT
NIYDMIKCLKASKVRVSVIGLSAEVRVCTVLTRETGGVYHVILDESHYKELLMHHVIPPP
ASSSSECSLIRMGFPQHTMGCLSDQDAKPSFSMAHLDNTSEPGLTLGGYFCPQCKAKYSE
LPVECKVCRLTLVSAPHLARSYHHLFPLDAFKEVRLEEYDGERYCRGCDGELKDQQVYVC
TVCQCVFCIECDLFVHESLHCCPGCIHNQPTPAPV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaccagaaaagacaaagcgctgggaaggcggctatgaaagaacctgggaa
gttctcaaagaagatgaatctggatctctgaaagccacgattgatgaaattctttttaaa
gacaaaagaaaaaggatctttgaaaatcgtggtcaagttcgacttggaatgatgcggcat
ctttatgtgatagtcgacagttcaagaacaatggaagaccaagatctgaaacctaataga
ctcacatgcactttaaagcttttggaattttttgtggaagaatactttgatcaaaatcct
atcagtcagattggcctaattgttactaggaacaagcgagcggaaaaactcactgaactt
gctggcaatcctaggcaacatataaatgcaatgaagaaagctgtggacatgacttgcagt
ggggagccgtctctgtacaactcgctgaatctcgctctgcagactctgaaacacatgcct
ggacataccagccgtgagatcttagtgatttttagcagcctgactacttgtgacccaaca
aacatctatgacatgataaagtgtttgaaagccagcaaagttcgagtatctgtgataggg
ctgtctgccgaggttcgggtgtgtactgtacttacacgagaaactggaggagtctatcat
gtaattctggatgaaagccactacaaggaactcctgatgcaccatgtgatccctccacca
gcaagcagctcttctgaatgttcacttatacgcatgggttttccacagcatacaatgggt
tgtctctccgatcaggatgcaaagccatcttttagtatggctcatttggataataccagc
gagccaggcctgacattaggtggctacttctgtcctcagtgtaaagcaaagtactctgaa
cttcctgtagaatgcaaagtctgtcgtctcacgctggtgtctgctccacacttggcgcgt
tcgtaccaccatttgtttcctctggatgcttttaaagaagtcagacttgaagaatatgac
ggagaaaggtattgccgtgggtgtgatggagagcttaaagaccagcaggtttatgtctgc
accgtctgtcagtgtgtcttctgcatagaatgtgacctttttgttcacgagtctttacat
tgttgtccaggctgtatacacaatcagcccaccccagcaccagtgtga
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integrated database retrieval system
