Xiphophorus maculatus (southern platyfish): 102216381
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Entry
102216381 CDS
T02923
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102216381
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102216381
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_6
zf-RING_5
U-box
Prok-RING_4
zf-RING_2
MRP-S31
Motif
Other DBs
NCBI-GeneID:
102216381
NCBI-ProteinID:
XP_005817496
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Position
14:23846939..23851418
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AA seq
557 aa
AA seq
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MAQPGSLVDSMKFFCSICRDLLKDPVTIPCGHSYCMNCIKDCWDGEDQRRIHSCPQCRKE
FIPRPELVKNIMLAELVEDLRKTGLQTAPVDHCYAGPEDVACDVCTGKKMKAVKSCLVCM
ASYCKNHLQPHYESPTFKKHNLVEASTKLLQNICSRHDEVMKIFCRTDQQCICYLCTMDE
HKGHETVPAATERAEKQKKLQESRQQIQQRIQDQEKDVKLLQQEVEAINVSADKAVEDSE
KIFTDLIRLLQERSSDVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSRHKIQPRKNFKDVTAAVSELRDKLLDILRQKRTKTSLTA
IKVGVLQLEPEPKTRHDFLKYSQEITLDSNTAYIDLLLSEGNRKTTLMKQQQSHPYHPER
FTYYDQVLSRESLTGRCYWEVEWRGEGVRLAVAYRSIRRGGGSDESAFGRNDKSWALRCD
KNSYQFWHNNIETPVSGTVSSRIGVYLDHSAGILSFYSVCLSTMTLLHRVQTRFTQPLYA
GVWLFNYGTTAEFIKAK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccaggaagtcttgtggattcaatgaaattcttttgttcgatctgtcgggat
ctactgaaggatccggtgactattccctgtggacacagttactgtatgaactgcattaaa
gactgctgggatggagaagatcagagaagaatccacagctgccctcaatgcaggaaagag
ttcataccaagacctgaactggtgaaaaacatcatgctagcagagttggtggaggatctg
aggaagactggactccaaactgcaccagttgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaagaagatgaaagctgtcaaatcctgtctggtctgtatg
gcttcctactgtaagaatcatcttcaacctcactatgaatcacctacgtttaaaaaacat
aatctggttgaagcgtctactaaacttctgcagaacatctgctctcgtcatgatgaggtg
atgaagatcttctgtcgtacagatcagcagtgtatctgttatctctgcactatggatgaa
cataaaggccatgaaacagtcccagctgcaacagaaagggctgagaagcagaagaagctc
caggagagtcgacaacaaatccagcaaagaatccaggaccaagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatgtctctgctgataaagcagtggaggacagtgag
aagatcttcactgatctgatccgtctcctccaggaaagaagctctgatgtgaagcagcag
atcagatctcagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tccagacataaaattcaaccccggaaaaactttaaggatgtgacagcagctgtgtcagag
ctcagagacaaactcttggacatcctgagacagaaaaggacaaaaacctctctgacagcc
atcaaagtgggcgttctacagttagagccagaacctaaaaccagacatgatttcttgaaa
tactcacaagaaatcactctggattcaaatacagcatacatagatctgttattgtctgag
ggtaacagaaaaactacattgatgaaacaacaacagtctcatccttatcatccagagaga
ttcacttattatgatcaggttctgagtagagagagtctgactggacgttgttactgggag
gtggagtggagaggggaaggagttcgtctagcagttgcatacagaagcatcagacgtgga
ggagggtcagatgaatccgcatttggacgaaacgataaatcttgggctttacgttgtgac
aaaaatagttatcaattttggcacaataacattgaaactccagtatcaggtacagtttcc
tccagaataggagtgtacctggatcacagtgcaggtattctgtctttctacagcgtctgt
ctttctacaatgactctcctccacagagtccagaccagattcactcagcctctgtatgct
ggggtttggctttttaactatggaaccacagctgagttcattaaagccaaatag
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