Xiphophorus maculatus (southern platyfish): 102219839
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Entry
102219839 CDS
T02923
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xma03036
]
102219839
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
102219839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
102219839
NCBI-ProteinID:
XP_023193015
Ensembl:
ENSXMAG00000003567
LinkDB
All DBs
Position
7:complement(22328983..22405985)
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AA seq
1660 aa
AA seq
DB search
MMEKPEESPADERGLQPPDRGLLHVWPSGGGTQQLCPETVLLSRPVMHVSLGENHGILLA
QGGLVFSFGELFWRGISVPVSAPVLEASLLGRMVVHVAAGGFHCGAISEQGGVYMWGENT
AGQCGQTDRASVINTTVPEPCPVTVVDSEVVPPAVVRVVSLACGREHSLALSAQNELWAW
GSGCQLGLVTNTFPVWKPQKVEHLAGRHVIQVACGAYHSLALVRSLPAQDFIAQSTPKIR
ERGRSPQCPLADREELVTTDDAVYCPLGVELSEVTRSETSSRRRVPRPRLHPAGKSSGSS
RGSSASLSSFSDDSRSNPKQKNFPACSRLEAEENRTECMLQADGSPKANPASDWAANKDS
AFSDDLELLNLLDKLSVQSESQNATATGDTDSVSSQTGSEDSCISSTPSSDLLTSSYKDD
SIFKMQTNNGVASAPLSSSPVCLEEVRLCVERERQAPLSCSLTNAHQKGNAAAAAAAAAS
GRRSLPGTPTHGSPRRRHQGASGSLCAGAGSDDSGDGLPSLETEVWSWGRGSEGQLGHGD
QLARLQPLCIKSLTGQEVIKVAAGSHHSLALTAQCQVYSWGSNLCGQLGRVDGPATVPQL
TKLSDGLRVWDLSAGQSHSLLLADGDCVQPVLLYCGQQSESPSAQSEKLQSRSSCQSSPL
KAKSCTARPTLLPFCIEMSYISSVSGGGRLCAALMDHNVMGFIAAIHDLASRERRFSCWM
NDVRRVIIAPLRKKETACQTLGDPCTHLFFALCDSFIQLSKLIGRHATALSYFLQNAQSR
DVTSFALLKHSEHFLETYKKYCSAVGDFQVMGGFQSLHKLSLDWLCGQQAVLSQLCGSDQ
SVSKEVDLVSMFYQPLQQLHHYSRVLLKMATCYDVLTEEYQSLHQGCSHYEVLSLSLLRK
KKEAETTQLFWKTHSGKTTESLRLPQRRVVCESSNRSLTPQYAGRFSNHWFILFNDILVH
TQGSLPPQSFFSSFRIYPLTCLWVKTITEDGSGLYTIKIICPEESLVLVASTPQEKNKWL
RSLNQAVDLVLGGAAQGSSPGVTAAVCRTASYKFVSDERFKDAQYSGGWMAGRVHGRGTM
KWPDGRVYKGNFKGGLEDGYGECVMPNKVQDKPDVYQGQWKEGKIHGFGKYKYGSGEVYD
GCFCDGRRHGYGMLSSGKLAGASSGLFIGQWVQDKKTGYGVHDDITRGEKFMGFWLDDQR
HGSAVVLTQYGVYFEGSFKENKMSGSGLLVSDDDTVFHGEFSDDWTINGKGVLTLANGDR
LDGLFSGEWSAGLKVVGTYVKPAMDDNKEKDEPPLGQYAVPAAQRWICVFDECWSRLGCD
AAGRGERTAAWENIAVTIATARRQSPDLSKSHTKVLESLEFIPQYGEAVTTANYDNIRRY
LTKACETPHHPLGWLVETLVTAYRMTYVGVGSNRRLLRQAVLELQAYLTHFYSIVRFLFP
GLPDDGGVIPDAPDISPYKTRRNSNKMDQGVLVVSCSSLLLPLLLPRLYPPLFTLYCLQQ
EPEEAQYWERILRLNKQPDQALLGFLGVQEKFWPHWMSILGEKKQIVSSSKDACFISAVE
TLQQISTTFTPSDKLLVIQKTFEELTLEVKPFLAGDFLWCMDDLFPLFLYVVLRARVRNL
GAEVSLIEDLMDPNLQHGEMGLMFTTLKACFIQIQQESTT
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaaccagaagaaagccctgcggatgagagaggcctccagcctccagacaga
ggcctcctccatgtctggccttcagggggaggaacccagcagctctgcccagagacggtg
ctgctgtccaggcctgtgatgcacgtctccctgggagaaaaccacggcattctcctggca
caggggggtctggtgttctcgttcggggagcttttctggagggggataagcgtcccggtg
tcggctccggtgctggaggcctcgctgcttgggaggatggtggtccatgtggccgctggg
ggcttccactgcggcgcgataagcgagcagggcggcgtttacatgtggggggagaacact
gcaggacagtgtgggcagacggacagagcctctgtcataaatactacagttcctgagccg
tgtcctgtcaccgtggtggacagtgaggtcgttcctcccgcggttgttcgggtcgtgagc
ctcgcctgtggacgggagcacagcctggctctgtcggcccaaaacgagctgtgggcctgg
gggagcggctgccagctcggcctggtcaccaacaccttccctgtgtggaaacctcagaag
gttgaacatctggcaggcagacatgtgattcaggtggcatgtggtgcctaccacagcctg
gcacttgtccgcagtttacctgctcaggactttatcgctcagagtaccccgaaaatcagg
gagcggggtcgatcacctcagtgcccgttggcagacagggaggaactggttacaaccgac
gatgcggtctactgcccgctcggggtggagctctctgaagtcacaagaagtgagacttct
tcccggagacgggttcccaggccgcggctccatccggctggaaagtcatctggcagcagc
cgcggctcctcagccagtttatcttcattctctgatgacagcagatctaatcctaaacag
aagaatttcccagcatgcagcaggctggaggctgaggaaaacagaacggagtgcatgttg
caggctgacggcagccctaaagctaatccggcgtcggactgggccgccaacaaggactcc
gcgttttctgacgacctggagctcctaaatttacttgataaactttctgttcagtcggag
tcacaaaacgccacggcgacgggcgacactgactcagtgagcagccagaccggatcagag
gacagctgcatttcttcaactccatcttcagatttattgacttcaagttacaaagacgat
tcgattttcaagatgcagacaaacaacggcgtggcgtctgcaccgctctcgtcttcgccg
gtgtgtctggaagaagttcgtctttgtgtggagagggagaggcaggcgccgctcagctgc
agcctcacaaatgcacaccagaaggggaacgcggcggcggcggcggcggcggcggcgagc
ggcagacgctcacttcctggaacccccacccacgggtcgccacggagacgccaccagggt
gcctctgggtcgctgtgtgctggtgcaggatcagacgattcgggagacgggctgccgtcc
ctggagacagaagtctggagttggggacgcgggtctgaaggacaactgggacacggagac
cagctggccaggctgcagcctttgtgcatcaagtctctcacagggcaggaagtgatcaaa
gttgctgcggggtcccaccattcgctggcgctcactgcacagtgtcaggtctattcatgg
ggaagcaacctgtgtggacagctcggtcgtgtcgacggccccgccactgtacctcagtta
acaaagctgtcagacggcctccgtgtttgggatctgtcggccggtcagagccactccctc
ctcctggcggacggcgactgcgtccagccggtcctgttgtactgcggccagcagagcgag
tcgccgtcggcgcagagcgagaagctgcagagccgaagctcttgtcagagctctcccctc
aaagcgaagagttgcacggccagacctacgctgctgcctttctgcatcgagatgagttac
atcagcagcgtgagcggcggcggccggctgtgcgcggcgttgatggatcacaacgtgatg
ggtttcatcgcggccatccacgatctggcctccagagagaggcggttctcctgctggatg
aacgacgtccgcagggtcatcatcgctccgctgcgtaaaaaggagacggcgtgtcagact
ttaggggatccatgcacgcacctcttctttgcactttgtgatagttttattcagctgagc
aagctgattggccggcacgccacggcgcttagctacttcctgcaaaacgcccagagccgt
gatgtaacttcctttgcccttctgaaacactctgaacatttcctggagacgtataaaaag
tattgttctgcagtcggcgactttcaagtaatgggtggattccagtcacttcataaactc
tcactggactggttgtgcggccagcaggctgttctctcccagctgtgtggatcagaccag
tctgtcagcaaggaggttgatctggtttcaatgttctaccagcctctgcagcagctccac
cattacagcagagtcctgctcaaaatggctacatgctatgacgtgctcactgaggagtat
cagtccctgcatcagggctgcagtcactacgaagttctctctttgtctctcctgaggaag
aagaaggaggctgaaaccacacagctgttctggaaaactcattctggcaaaactactgag
agtctgcgtctgccacagcgccgtgtcgtttgtgagagcagcaacagatctctgactcct
caatacgccggccgcttctccaatcactggtttatcctgttcaacgacatcctggtgcac
acacagggatctcttccccctcagagctttttctcctcatttcgaatctatcctctgacc
tgcttgtgggtgaaaacgattaccgaagacggcagcggactttatacgatcaaaataata
tgtccagaggagagtctcgtcctggtggcctcaacgccacaagaaaagaacaagtggctg
cggtccctgaaccaggcggtggatctggtgctgggaggtgcagctcaggggtcatcgcca
ggggtcacggctgcagtgtgccgtacggcgtcgtacaagttcgtctcagatgagcgattc
aaagacgctcagtacagcggcggctggatggcaggacgagtccacggcagaggaaccatg
aagtggccggacggccgagtgtacaagggaaacttcaagggtggactggaggatggttat
ggagagtgtgtaatgccaaacaaagtgcaggacaaacccgacgtgtaccaaggacagtgg
aaagaggggaagatccatggctttggcaagtacaagtacggcagcggagaggtgtacgac
ggctgtttctgtgacggccgtcgccatggttacggcatgctgagctccggcaaactggcc
ggcgcgtcttcaggccttttcatcggccaatgggttcaggacaagaagacgggctacgga
gtccacgacgacatcacgagaggagagaagttcatgggcttctggctggatgaccagcgg
cacggcagcgctgtggtcctcacccagtatggagtttattttgaagggtcattcaaagaa
aacaagatgagtggttctggcctgttggtgtcagatgatgacacggtttttcatggggag
ttcagtgacgactggaccatcaatgggaagggagttttgacgcttgcaaatggcgaccgt
ctggacggcctgttcagtggcgagtggagcgccggtctgaaggtcgtaggaacatacgtc
aaaccagcgatggatgacaacaaagagaaagatgagccacccctgggtcagtacgcggtg
cccgcagctcagaggtggatctgtgtgtttgacgaatgttggagtcgactcggctgtgac
gccgccggcagaggagaacggaccgcagcctgggagaacatcgccgttaccatagcaacg
gctcgacggcagagcccagacctcagtaaatctcacaccaaagttctggagagtttggag
ttcatccctcagtatggagaggcggtcaccactgcgaactacgacaacatcagacgatac
ctcactaaggcctgcgagacgccccaccaccctctgggctggctggtggagacgctggtg
acggcgtacaggatgacgtacgttggcgtgggatcgaaccgccggctgctccggcaggcg
gtgctggagctgcaggcctacctcactcacttctacagcatcgtcaggtttctgtttcca
gggttaccagatgatggcggcgtcatcccagacgctcctgacatcagtccgtataaaaca
cgacgaaactcaaacaaaatggatcagggtgtgttggtggtgagctgctcctcgctgctc
ctccctctgctgctgcctcgactctacccgcctctcttcaccctctactgcctgcagcag
gagccggaggaggcccagtactgggagcgcatcctgcggctcaacaagcagccagaccag
gcgctcctcggcttcctgggagttcaggagaagttttggcctcactggatgtcgattctg
ggggagaaaaagcagatcgtttccagcagtaaagatgcctgtttcatttctgctgttgag
actctccaacaaatcagcaccacgtttacgccatcggataaactgttggtgattcagaaa
acgtttgaggagctgacgctggaggtgaaacccttcctggccggggacttcctgtggtgc
atggacgacctgttccccctcttcctctacgtggtgctgagagccagggtcaggaacctg
ggagctgaagtcagcctgattgaagacctgatggatcccaacctccagcatggagagatg
ggcctcatgttcacgaccctaaaggcttgcttcatccagatccaacaggaatccacaaca
taa
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