Xiphophorus maculatus (southern platyfish): 102220843
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Entry
102220843 CDS
T02923
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04140
Autophagy - animal
xma04148
Efferocytosis
xma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102220843 (vps11)
04148 Efferocytosis
102220843 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102220843 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102220843 (vps11)
Membrane trafficking [BR:
xma04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102220843 (vps11)
Hops complex
102220843 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
TSGP1
ADIP
DUF4618
zf-RING-like
Kbp-5
Motif
Other DBs
NCBI-GeneID:
102220843
NCBI-ProteinID:
XP_023198505
Ensembl:
ENSXMAG00000017073
LinkDB
All DBs
Position
11:32298405..32306601
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AA seq
928 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPADSGKTFILPKGISASDSGRGHVVLGDMEGQIWLMTRSL
QLTSFQAYKLRVTHLFQLKQHSILVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAV
PGNKPAEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSCPVTGLAFR
QMAKVTHLFVATLEKVFCYTLSNKEYPKVELDTHGCALCCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLTHWHRGYLFLLIKDMKSPNKSGFGSGENSLSEKQVLTIYD
LDNKFIAYSASFDDVIDVLAEWGSFYILTRNGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTTGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSENEVHFDVEIAIKVLRQA
GYHSHAVFLAERHQHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQTESNMKRYGKTLMHHV
PEGTTLLLKRLCTNYHPNENSMEKVSLDSSLLNKVWANSEEFIPIFANNPRELKAFLEHM
IEVDPRSSQGVYDTLLELRLQDWAHEQDPEKKKVCQGEALSLLRSDNTVFDKALVLCQMH
NFKEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVDACKRYGDQEGCLWEQALGYFARKEED
CKAYISEVLHHIDQKNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKI
CQYREETSHLRSEIQELKASAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAES
DAECPTCTPENRKVMDLLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLV
TDPPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttctacaatggagaaaatttgtcttctttgataaggacacggtgaaggat
cctgcagatagcggaaaaacctttattcttcctaaaggaatctcggcgagtgactccggc
cggggacatgttgttctgggagatatggaaggacagatctggctgatgacacgttccctg
cagttgacgtcgttccaggcatacaagctgcgggtgactcacttgttccagctgaaacag
cacagtatcctggtatcagtgggacaggatgaacatggcattaatcctctggtgaaggtc
tggaaccttgacaagagagacagtgggaatccactctgcaccagaatctttcctgcagtt
cccggcaataaaccagctgaagtgtcttgtctcagtgtacacgagaacctgaacttcatg
gctataggcttcacagatggcagcgtggttttaaccaaaggggacatcaccagagaccgt
cacagtaaaactctgactctgcatgaggggagctgccccgtcacaggcctggccttccgc
caaatggcaaaagttacacatttgtttgttgccactctggaaaaagtattttgctacact
ctgtctaacaaggagtatccgaaagtagagctggatacccatggctgcgccctgtgctgc
tcgtccctggcagatccatcccaggattcccagtttattgtggctggggatgaatgtgtt
tacctgtaccagcctgatgaacgagggccctgctttgctttcgatggccacaagctgttg
acccattggcaccggggatacttgttcctgctgatcaaagatatgaagtctcccaacaaa
tcagggtttggcagcggcgagaactcgctgtcagaaaagcaagttttaacaatctatgac
ctggacaacaaattcatcgcctacagcgcctcattcgatgatgtcattgatgtgttggca
gaatggggatccttctacattctgacccgaaacgggaaaatgtttgttctgcaagagaag
gacacacagacaaaactggagatgctgttcaagaagaacttgtttgtcatggccataaac
ttggctaaaagccagcatctggacagtgacggtctgtcagagatctttcgacagtatggc
gatcatctgtacctgaagggagatcatgatggtgccatccagcagtatattcgcaccact
gggaagctggagccttcgtatgtcattaggaaattcctggatgcccaaaggatccacaac
ctgacggcatacctgcaggcccttcaccgccagtctctggccaatgcggaccacactaca
ctgctcctcaactgctatactaaactcaaagacagctccaagctggaagagttcatcaag
agcagcgagaatgaggtccactttgatgttgagattgccatcaaggttcttcgccaagct
ggataccacagtcatgctgtgttcctggctgaacgccaccagcatcatgagtggtacctg
aagatccagctggaggacctgaagaactatcaggaaggcttgcggtacattggccgtctg
ccttttgaacaaactgaaagcaacatgaagcgctatggcaagacgctcatgcaccatgtt
cctgaaggcaccacattgctcctgaagcgcttatgcaccaactatcatccgaatgaaaac
tcaatggaaaaagtcagcctagacagtagtctgcttaacaaggtctgggcaaattctgaa
gaattcatcccaatttttgccaataaccctcgtgagctgaaagccttcctggagcatatg
attgaggtggaccctcgttcatcccagggtgtgtacgacacactgctggagctccgactg
caagactgggcacacgaacaagatcctgagaaaaaaaaggtttgccagggagaagccctt
tcgctgctcagaagtgacaacactgtgtttgataaggccttggtcctttgccagatgcac
aactttaaagaaggtgtcctctacctgtatgagaaaggcaaactttaccagcaaatcatg
cattaccacatgcagaatgaggagtatggtaaagttgtagatgcctgcaaacgatatgga
gaccaggagggctgcctttgggagcaagctctcggatactttgccagaaaagaggaggac
tgtaaggcctatatcagtgaggtcctacatcacattgaccagaagaacctcatgcctcca
ttacttgtcgtgcagacactggcacacaactcaacggccactctgtcggttatcaaagac
tacctcatcaataagctgcagcgagagagccagcagatagaagatgacgagcgtaaaatt
tgccagtaccgtgaggaaacgtctcatctccgctctgaaatccaggagctgaaggcaagt
gccaagatattccagaagactaagtgcaacatgtgtaacagccccttggagcttccatct
gtacacttcctgtgtagccactcctttcaccaacactgctttgaaagttatgcagagagc
gatgcagagtgtccaacatgcactccagaaaaccgcaaagtcatggatctgctgcgcgct
caagaccagaaacgggatctccatgaccatttcaatcgacagctccgaagctccaatgat
ggtttctcggtggtggctgattattttggtcgaggagtgtttaataaactgacgctggtc
actgaccctccagggagcaaaactgttggaagtctagaagtcaacctgcagcgagacctg
ctgatccacaccaagagaaactgctag
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