Xiphophorus maculatus (southern platyfish): 102223234
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Entry
102223234 CDS
T02923
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102223234 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102223234 (usp47)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102223234 (usp47)
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102223234 (usp47)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102223234 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
102223234
NCBI-ProteinID:
XP_023187990
Ensembl:
ENSXMAG00000003148
LinkDB
All DBs
Position
4:17581449..17602391
Genome browser
AA seq
1355 aa
AA seq
DB search
MEMVPSEENQFVPKEIHNAAEEPRVLCIIQDTTRARTVNERLTLNLPASTTLSKLYEDVA
HKAGYVNGSFDLTWGNTQNMAPLEHNSEMSLSDSSFEPDGKKNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERFIGPLQRDGSAGGSGDYSPSYSYSSILSKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERALKPKSLLTFELFSVMVHSGSA
AGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYML
IYRLKDPSRNSRFLAVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCVHPLKM
MMESKLEVHKDKTLREATEMAYKLMELEGVVTLDCCRLVKYDEFHEYLERSYEGEEDTPM
GLLLGGVKSSYMFDLLLETRRSDQVFQPYKPGEVMVKVHVVDLKTETIALPISVRAYLNQ
SITEFKQLIAQATGLSAETMRVVLERCYNDLRLLNVPNKTLKAEGFFRSNKVFVESSVLT
DHQVPFTDSLLWKLLDRHGNTIRLLVLLPEQSPGTLASRTLCQKAGEDSDGPFEGLKGNR
KSVEAILEESTEKLKNLSLQLQQGSSASDSQKSSDTSDFEHIESPTQEADSNSSLCVAAD
SRELENRISGSSDTENQFVCEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNADSGPIQ
LANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQYLYFRAEPYS
QDDASWDTHKCLVVHVDKRITLAAFKQNLEPYVGVPSSQFKVFRVYANNQEFESVRLNET
LSSFSDDNKITIRLGRALKKGEYRVKVFQLLVNEPEPCKFLVDTVFAKGMTVRQSKEELL
PQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLEVLDDSEKMK
SMSQLAILTRKWNPATMKLGPFQEAILESSSVEELKEKLSEMSDIPLENLEFAKGRGTFP
CDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSRDEPLELSEDERNELMKKES
SRLLKTGHRVSYSPRKEKALKIYLDGGPVRDPGQD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggagaaccagttcgtacccaaagagatacataatgcagct
gaggagcccagagtgctgtgcataattcaggacacgaccagggcgaggacggtcaacgag
aggctgaccctcaacctgcccgcttccaccactctctccaaactttacgaggacgttgcc
cataaagccggatatgtgaatggctcttttgacctcacctgggggaatactcagaacatg
gcaccgctggagcataacagtgagatgtcgctctctgattctagctttgagcctgacggt
aagaagaattttctccagcttacagataaagatggagagcaaccacagattgcatcggat
gagtcaggaacagcagatagcagtgggctggatgacagttcccaggagcggtttatcggc
cccctgcaaagagacggcagcgcgggcggcagcggtgactacagtccatcgtactcctac
tcatccatcctcagcaaatctgagacaggttatgttggtttggttaaccaagcaatgacc
tgctatttgaacagtctcctccaaacactgtttatgactcctgagttcagaaatgcactc
tacaattgggagtttgaggaatctgaggaggatcccgtcaccagtatcccctaccagctg
caaaggctctttgttctgcttcagaccagtaagaaacgggcgattgagacaactgatgta
actaggagcttcgggtgggatagcagtgaggcctggcagcagcatgacgtccaggagctg
tgcagggtcatgttcgatgccctggagcagaagtggaagcagacagaacaggctgatctg
atcaaccagctgtaccagggaaagctgaaggattatgtgcgttgtttagagtgtggatat
gaaagctggagaatcgacacttacctggacatccctcttgtgatcagaccctttggagcc
agtcaggcctacggaagtgtggaagaagctttgcaggcattcatccagccagaaaccttg
gacggccccaaccagtacttttgtgagcgctgcaaaaagaaatgtgatgcccgaaagggt
ctgaggtttctccacttcccctacctgctgacgctgcagctgaaaaggtttgattttgac
tacaccactatgcatcgcatcaagcttaacgaccgcatgactttccccgaggagctcgat
atgagcccgttcatcgatgtggaagacgagaagtcgcctcagacagagagctgcactgat
agcggagcagagaatgaaggcagttgccacagtgaccaaatgagcaatgatttttccact
gatgactgtgtggatgagggcatctgcttggacagcaccagtagtacagaaagggcattg
aagccaaagagcttgctgacctttgagttgttctccgtcatggtccattcgggcagcgct
gcgggcggacactactacgcctacatcaagtccttcagtgatggccagtggtacagtttc
aatgatcagcatgttagcaagatcacccaggatgatatcaggaagacatatggggggtcc
tcagggagcagaggctattattccagtgcctttgcaagttccacaaacgcttacatgctg
atttatagattgaaagacccctcaaggaattcaaggtttttagctgtggaagatttccca
gagcacataaagagtttggttcagaaggagaaggaatccgaagagcaagagaagcgccag
agagaaatcgaacgaaacacttgcaagatcaagctcttctgtgtgcatcccctcaaaatg
atgatggagagcaagttggaggttcataaagataaaactctcagagaagcaacagaaatg
gcctacaagctgatggagctggaaggagttgtgactctggattgctgtcgcttggtaaag
tatgatgagttccatgagtatctggagcggtcgtacgaaggcgaggaagacacccctatg
gggctcctgcttggaggcgtcaagtcctcatacatgttcgatttgctccttgagactcgc
cggtctgatcaggtcttccagccttataaacctggagaggtgatggtgaaggtccatgtt
gttgatctgaagactgagaccatcgcccttccaatcagcgtgcgagcgtacctgaaccag
tctatcactgaattcaagcagcttatagcgcaggctacaggtctgtctgcagaaacgatg
cgtgtggtcttggagcgatgctataacgacctcaggctgctcaacgtcccaaacaagacg
ctaaaagccgagggtttcttcaggagcaataaggtttttgtggagagctccgtgttgact
gatcatcaagttccttttaccgactcgctcttgtggaaactgttggatcgccacgggaac
acgatccgcctgcttgtcttgctgcctgagcaatctcctggcaccctggccagcagaact
ctttgtcaaaaagcaggagaagactctgacggtcccttcgaagggttgaagggcaacagg
aaatctgtggaagcgatactggaggagagcacggagaaattaaagaacctgtctctgcag
ctgcagcagggctccagcgccagcgacagccagaaaagttccgacaccagcgactttgaa
cacatcgagtcgccgacgcaggaggcggactcgaactcttcgctgtgcgtggcggcagac
agcagggagctggagaaccggatatccgggtcctccgacacggagaaccagtttgtttgc
gaggagcgttcagactctgaggtgaacaatgaccgtagcacaagctcagtggacagcgac
atcctgagctccagtcacagcagcgacacgctgtgcaacgcggacagcggccccatccag
ctggccaacggcctggattcacacagtatcaccagcagccgacgctccaaagcccatgag
ggcaaaaaggagacctgggatactgctgaggaagactctgggacagacagcgagtatgac
gacaacgggaagagcaaggcagaagctcagtacctgtacttcagagcagagccttactcc
caggatgacgcttcatgggatacacacaaatgtttagtggttcacgtggacaagagaata
actttggcagcattcaagcagaacctggagccctacgttggagtcccgtcgtcccagttc
aaggtgtttcgagtttacgccaacaaccaggagtttgagagcgtacggctcaacgaaacg
ctctcatcgttctccgacgacaacaagataaccattcgactgggaagagcattaaaaaag
ggtgaatacagagtcaaagtgtttcagctgctcgtgaatgaaccagagccttgtaagttt
ttagtggacacggtctttgctaagggcatgactgtaagacagtccaaagaggagcttctt
cctcaattgaaagagcagtgcaagctcgacctcagcatcgacagggttcgtctcaggaaa
aagacgtggaagaatccaggaacggtgtttttggattaccacgtttacgaggaagacatc
agcatttcctcaaactgggaggttttcctggaagtcttggatgactcggagaagatgaag
tccatgtcgcagctggccattttgacccggaagtggaacccagctactatgaagctggga
cctttccaggaagcgattctggagagcagcagtgtggaagaactaaaggaaaagctcagt
gaaatgagtgatattcccctggagaacttggaatttgcaaagggcagaggaacgtttcca
tgtgatatatccgtgttggaaatccatcaggatttggactggaacccaaaagtttcgact
ctgaatgtgtggcctctgtacatctgtgacgacggagccgtggtcttctacagggacagc
agagacgaacctctggagctgtcggaggacgagcgcaacgagctgatgaagaaggaaagc
agccgcctgctgaagacgggacaccgcgtcagctactcgccacgcaaagagaaggccctc
aagatctacctggacggcggccccgtgagggacccggggcaggactga
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integrated database retrieval system
