Xiphophorus maculatus (southern platyfish): 102223254
Help
Entry
102223254 CDS
T02923
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102223254 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xma01002
]
102223254 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102223254 (usp1)
03400 DNA repair and recombination proteins [BR:
xma03400
]
102223254 (usp1)
Enzymes [BR:
xma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102223254 (usp1)
Peptidases and inhibitors [BR:
xma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102223254 (usp1)
Ubiquitin system [BR:
xma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102223254 (usp1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
102223254 (usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102223254
NCBI-ProteinID:
XP_023195638
Ensembl:
ENSXMAG00000009946
LinkDB
All DBs
Position
9:3753029..3761402
Genome browser
AA seq
798 aa
AA seq
DB search
MSGLLAENAGAGQESPVKRNKLSLKFFQKDTKRALNFSEPQAEEAKTLEEEDSPASCDQV
VYGPAPCPSSPGLPIPCEKKENLVPFVGLNNLGNTCYLNSILQVLYYCPGFREGVKNLYD
LSKRPEKPKDETAKNEESQQSECVSETVPAHIELLGSFSSLMTSVEQLQSSFLLNPNGFS
EGELATPPRKILHTIRQLNPMYEGYLQHDAQEVLQCILGYIQEACDTIRKEQELERKEEE
DDDRDVKKENGIPSDSSFSGTETRASTDEVSGKRKSDTEVGNAKKKPKSKKSESTEENVC
RNKPFTRSKRKSSSDITVDSTQSKEGEQEEEEKKNLNPDEEKDEKASRKETSGKRKKRGT
LGWLRSSGKQPSIFSKFCSVGKISSTNPKPQNKSEPENTPSEEPKQKSTQQSVARKSATG
QIEKQQDVLGLMEKLFQGRLVLRTRCLECESFTERREDFQDISVPVLDDQPKSPEDLFEV
SPDPKPEMKTLTWAISQFASVERIVGEDKYFCETCHHYTEAERSLLFDKTPEVITIHLKR
FSASSLEVDPYAGLSKVNTPLQTPLTLSLNEWCTKPSAATGQQYELFAVVMHSGVTISSG
HYTTYIRMSDLKDAKVWLQDKKEKVTEEDVKDSKEGAQTDENTTFDDGEVSVSLSTRGQR
RAGLASTKSGSKKLLEGGVGLLGGQRSLPNCDLGSGSKAANRDAAEGSKRRKTLSSSSQN
AGGLKKELEDAPMAPPGGMEAAEQQALTSLLEYEGKWLLFDDSEVRLFVEEDFLRACSPE
TCSSSTPYLLFYKRMPEP
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtctgctggctgagaatgctggagcaggacaggagagtcctgtgaagaggaac
aaactttccttaaagttcttccagaaggacacaaaacgagctctgaatttctccgaacct
caagcagaagaggccaaaacactagaagaagaagattctccagccagctgtgatcaggtg
gtgtatggccctgccccctgcccatcttcacctggccttccaatcccatgtgagaagaaa
gagaacctggtgccttttgtgggtctcaataaccttggcaacacctgctacttaaacagc
atcttgcaggttctgtattactgccctggcttcagagaaggggtcaagaacctgtacgac
ctttccaaaagaccagaaaaaccaaaggatgaaactgctaaaaatgaagagagtcagcag
tcagagtgtgtgtctgagactgtgccagctcacatcgagctccttgggagcttcagcagc
ctgatgacctcagtggagcagctgcagtccagcttcctgctcaaccctaatggcttcagc
gagggagagctggctacgccccctcgcaaaatacttcacaccatcaggcagctgaaccct
atgtatgaaggttatctccagcatgatgctcaggaggttctgcaatgcatcctgggatac
attcaggaggcctgtgacactatcagaaaagagcaggagctggagaggaaggaggaggag
gacgacgacagagacgttaaaaaggagaatggcattccctcggattccagtttctctggg
acggaaaccagagcttccacggacgaagtcagcggaaagaggaagagcgacacagaggtg
ggaaacgccaagaagaagcccaagtctaagaagtctgagtccactgaggaaaatgtctgt
agaaacaaacccttcactcgctccaagagaaagtcctccagtgatatcacagtggatagc
actcagagtaaagagggagagcaggaggaagaggagaagaagaatctgaatcctgatgaa
gagaaagatgaaaaagcatcccgtaaagagacaagtgggaaaagaaagaagagaggtact
ctgggttggctgagatcgtcagggaagcagccgagtattttctcaaagttctgcagcgtc
gggaagatcagctctacaaatccaaaacctcagaacaaatccgagccagagaacacacca
tcagaggagccaaaacagaaaagcactcaacagtctgtagcaaggaagtcagctacaggt
caaatagagaaacagcaagacgttctgggcctgatggagaaactgttccagggccgactg
gtgctgaggactcgttgtctggagtgtgagagcttcacagaacggagagaggacttccag
gacatcagcgtgccggtgctggacgaccaaccgaagagtccagaggatctatttgaagtc
tctccagacccgaagcctgagatgaagaccttgacgtgggccatttctcagtttgcctct
gtggagcgcatcgttggtgaagataaatacttctgtgaaacctgtcatcactacacggag
gctgaaaggagtctgctgtttgacaaaactcctgaagtcatcactattcaccttaagcgc
ttctctgccagcagcttggaggtggatccgtacgcaggcctctctaaagtcaacactccc
ttacagacgcccctcaccttgtctctgaacgagtggtgcacaaagccatcggctgctaca
gggcagcagtatgaactgtttgctgtggtcatgcacagtggtgtcaccatcagcagcggc
cactacaccacctacatccgcatgtccgatctgaaggacgcaaaggtctggctgcaggac
aagaaagaaaaagttactgaggaggatgtaaaagatagcaaagagggagcacagacagac
gaaaacacaaccttcgacgatggcgaggtgtcggtcagcctgagcacaagggggcagcgg
cgagcaggtttagctagcactaaatcagggagcaaaaagcttttggagggaggcgttgga
ctcctggggggacagagaagtttgcccaattgcgacctgggaagcggcagcaaagcagct
aaccgtgacgcagcggagggatctaaacggagaaagacgctaagcagctccagccagaat
gctggcggactcaaaaaggagctggaagatgcgccgatggctccccctggtgggatggag
gcagcagagcagcaagctttaaccagcctgctggagtatgaggggaaatggctgctgttt
gatgactctgaagtgcgtttgtttgtggaggaggacttcctgcgagcctgttctcctgaa
acgtgctcctcatccacaccctacctgctgttctacaaaaggatgcctgagccctga
DBGET
integrated database retrieval system
