Xiphophorus maculatus (southern platyfish): 102225601
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Entry
102225601 CDS
T02923
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102225601
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102225601
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
zf-RING_6
MRP-S31
Gp58
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
102225601
NCBI-ProteinID:
XP_023190762
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Position
6:26433713..26436890
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AA seq
551 aa
AA seq
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MAQQENQPDRLKFSCSICLDLLKDPVTPSCGHSYCMNCIESFWDGEDQKGIHSCPQCRKT
FIPRPVLEKNIMLADELKKTGLQSAPADLRSAGPEDVACDFCTGRKLKAIKSCLVCLASY
CEKHLQPHYDSATFKKHKLMEPSKNLQENICSKHDEVMKMFCRTDQKCICYLCSVDEHKG
HDTVSAAAERTERQRELEERRGNIQQRIQDREKDVKLLQQEVEAINHSADKTVEDSEKIF
TELIRLLQKRSSDVKQQIRSQQETEVNRVKDVQEKLEQEITELKRKDAELEQLSHTEDHN
QFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVTG
VDVLLSEPEPNSRDDFLKYSCEITLDPNTAHIQLLLSEGNRKVTLMEQQSYFSHPDRFSK
WFQILSRETLTGRCYWEVEKTETGVHLAVAYRNISRTGMESRFGCNDKSWALYCHQNSYC
FWHNSISTSIQGPVSSRVGVYLDHRAGILSFYSVSESMTLLHRVQTRFTEPLLAGLRFFN
CGETTKFCKPT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagaaaatcagcctgaccgactaaaattctcctgttcgatctgtctggat
ctactgaaggatccagtgactccttcctgtggacacagttactgtatgaactgtattgaa
agcttctgggatggagaagatcagaaaggaatccacagctgccctcagtgcaggaaaacc
ttcataccaaggcctgtgctggagaaaaacatcatgcttgctgatgaactgaagaagact
ggactccaatctgctcctgctgatctccgctctgctggacctgaagatgtggcctgtgat
ttctgcactggaagaaaactgaaagccatcaagtcctgtttagtctgtctggcctcttac
tgtgagaaacaccttcagcctcattatgattcagctacttttaagaaacacaagctgatg
gagccgtccaagaacctccaggagaacatctgctctaagcatgatgaggtgatgaagatg
ttctgccgcactgatcagaagtgtatctgttatctctgctctgtggatgaacacaaaggt
catgatacagtgtcagctgcagcagaaagaactgagaggcagagagagctggaggagaga
cgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacag
gaggtggaggccatcaatcactctgctgataaaacagtggaggacagtgagaagatcttc
actgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcagatcc
cagcaggaaactgaagtgaatcgagtcaaagatgttcaggagaagctggagcaggagatc
actgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcacaac
cagtttctcctcaactacccctcactgccagcactcagtgagtctacacactcatccagc
atcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctcaga
gagaaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcactggg
gtggatgttctactgtcagaaccagaaccaaacagcagagatgatttcttaaaatattct
tgtgaaatcacactggacccaaacacagcacatatacaactgttactatcagagggaaac
aggaaggtgacactaatggagcaacagtcttattttagtcacccagacagattcagtaaa
tggtttcagattctgagtagagagactctgactggacgttgttactgggaggttgagaaa
acagagacgggggttcatttagcagtcgcatacaggaacatcagcagaactgggatggaa
agtagatttggatgcaatgataaatcctgggctctatattgtcaccaaaactcttattgt
ttttggcacaacagcatctcaacctccatccaaggtccagtttcctccagagtcggagtg
tacctggatcacagagcaggtattctgtccttctacagcgtctctgaatccatgactctc
ctccacagagtccagaccagattcactgaaccgctgctggctggacttcgatttttcaac
tgtggtgaaactactaaattttgtaaaccaacatag
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