Xiphophorus maculatus (southern platyfish): 102226650
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Entry
102226650 CDS
T02923
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein
KO
K10896
fanconi anemia group M protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102226650 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102226650 (fancm)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
102226650 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
102226650
NCBI-ProteinID:
XP_014325085
UniProt:
M3ZZU0
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All DBs
Position
19:complement(3655310..3699570)
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AA seq
1911 aa
AA seq
DB search
MSGGSNQRTLFQTWGASVSQNKAVQSGKDARKATGAIGTSSSRAQVAPTNPPPHQQKSPW
TVIGQNSTHTAVRQEDIIPEDEDDDDLMVVAVYEAERSLQLEKSDIQNNHATGQSVAPFS
SPTCRKIYPDLPGFDSSSADVWIYPTNYPIRDYQLKISEASLFQNTLVCLPTGLGKTFIA
SVVMYNFYRWYPAGKIVFMAPTKPLVAQQIEACYKVMGIPQDHMAELTGSTAAKQRQEVW
KSKRVFFLTPQVMVNDLSRETCPAKEIKCVVIDEAHKALGNHAYCQVIRQLSSQTLQFRV
LALSATPGGDTKSVQSVISNLLISHIELRSEESPDIQAHSHQRSVEKVVVPLGEKLSGHQ
TRYLQVLERFMSRLVQNRVMGHKDLRALSKYQLILARDQFRKNPPPHIKGSHQGVLEGDF
ALCISLYHGYELLIQMGLRSLFFYLQGIMDGSREMSRAKNELQRTPTFMDLYQEMETMFL
TPPDGPFIYSHPKLEKLEEVVLQHFNVWVQSSAETNDGVSTRVMIFSSFRESVQEIASML
NRHAPLIRVMTFMGQASAGKGVKGFTQKEQLEVVHRFRQGGFNTLVSTCVGEEGLDIGEV
DLIVCFDAQKNPIRLVQRMGRTGRKRQGRIVVILTEGREERTYNQSQSNKRSVYKSITGN
RNGFRMYPSSPRMLPEGMNPQLHKIHITSGQFDHKESSRKSVRGRRSHTAGRTSLIHPQN
LIRQESPTSDGFLSRAEYSLWSSTMRLEEHEAHPTLKLSHFMSIPSDSTPQEATSRDKPP
SRELSLWEWRHWQHKLLPFHAVDHSLRCRHFSAVMQLIDGMRDESEGECLYEQQLLPYLQ
SDDADAKRQKKPKAPKNCSKTNKSKTSHSSRSELKYIDEEAEMEDAASRLIPEKQRLPDE
RLTDDLNPDQADSPSHNSDDDCVIVNQTFRDPANPGDVPEVNTKNNEDDDLQEMFYLPKT
YPALLSPKTLKNQNDILVNVAELLSRSPPSPENILEAGRTLTCLPPSPELGDQPFPVRFS
LEVDDDDDVEAGIEDGEPHSPTWDEVFEDENIRYDKKEMDLKSVDDAEECVSMDADCVSE
DRVHVQMDESMDLFEDDEAFMQMTIPDIPTPEDSITAKTTIDDEGIEKISKDVDKDCTEI
LNVVNKAPFSDTRLNIQTSHNSTEDHYSKVSFLVKANPEPLDSSHDLFSVNFDLGYSLED
SEDEAEVEVASPSPKKQAKSAVSNSSTPRRSFARLFKESKSSSQIKTDYWKSKTEELPSP
ITLLGPRQMLLSRIAEPDSSRAKQKQAEGDSLQELIHVGESSPHPAECCSDSEEEVVLLK
RRHHKVNPLSSPEVSKSLSDVDSPVVAKKKRSSVLNTTDETQAGDFLDDDFQNCSIFMRR
KTTTGAKRQQIQQSSNKNPRGQKARHFLDEEAELSEDEEDVSSDEEDGADLNRSLEGFVV
DNMHLSQGLNDSEMHEVYLKSVRSPAVRGKFKMSYKNHQNMDIFSQVPEMDETYAEDSFV
VGSDEEEEESNEEEPEDVELLPDVSLIDGRRQYATRRRIFLHKARAGLETNARTRPAAEQ
RTRTKRSRVVCLSESSEEETEEVGKNQNPDPSGRKTVSSAVASVASKVSLLSKEQSEEQQ
NERRRQRLENQHLLSDELDFAEQEPTLITGLPSTSSAAQGSAAQDPVPPVTEPPPPPPLP
GSVSILVDSRCTGGMVELVMSLRQRHGADVHVCSLDSNYSIVSNRMAVMRQSQSDLAAMQ
NRKRLAERLSNMQELFERVCLIVEKDRSKQGEVSRPFQRTRYYDNTLAALVRAGVRLLWS
DGAEESAGLLADLAKLEQRKGQGIAVPLKVKGQRREQALQMYLSLPSVSHVHALNLLHNF
SCVAQLMNGSVESIQKGGCMSRSRAEEIYRFLRRSCDSAHFTKTPKAGKNG
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggttcaaatcagagaactttgttccagacttggggggcttctgtgtcccag
aacaaagcggtccaatcggggaaggatgcccgaaaggctactggtgcgatcggaacatcc
tccagcagagctcaggtagctccaacaaaccctcctcctcatcagcaaaaatctccatgg
acagtaattggtcagaatagcacacatacagcagtgagacaagaagacatcatccctgaa
gatgaagatgacgatgacttaatggtggtggctgtctatgaagctgaaaggagcctccag
cttgagaagagtgacatacaaaataaccatgcaacaggacagagtgttgctccctttagt
agcccaacctgtaggaagatatatccagatctcccaggttttgacagctcctcagctgac
gtgtggatctatcccaccaactatcctattagagattatcagctgaagatatcagaggct
tccctgttccagaacacactggtgtgtctccctactggtttaggaaaaaccttcatagcc
tctgtggttatgtacaacttctaccgctggtatccagcaggaaagattgtgttcatggct
cccaccaaacctctggtggcccagcagatcgaggcctgttataaagtgatgggaatcccc
caggaccacatggctgagctgacaggcagcacggcagcaaagcagaggcaggaggtgtgg
aagtccaaacgcgtcttcttcctcacccctcaggtgatggtgaacgatctttctagagaa
acctgtcctgcaaaggagatcaagtgtgtggtgatcgatgaagctcacaaggcattgggt
aaccatgcctactgtcaggtgatcagacagctgagcagtcagacgttgcagtttcgtgtc
ctggccctcagtgccactccaggaggagacacaaagtcggttcagtccgtgatttccaat
ttgctgatttcacacatcgagctgcggtcagaggagagcccggacatccaggctcattcc
caccagcggagtgtggagaaagtggtggttcctctgggggagaaactttcaggccaccag
actcgctacctccaggttctggaaaggttcatgtcccgtttggttcagaaccgagtgatg
ggccacaaggacctgcgggcgctcagcaagtaccagctcattctcgccagggatcagttc
cgcaagaacccgccgccgcacatcaagggttctcaccagggagtcctggagggcgacttt
gccctttgcatcagcctgtaccacggctacgagctgctgatccagatggggctccggtcg
cttttcttctacctacagggaatcatggacggatccagagaaatgtccagagctaagaat
gaattgcagaggactccgacgttcatggatctgtaccaggagatggagacgatgttcctg
acgccaccagacggtccattcatttacagccatcccaaactggaaaaactggaggaagtg
gtgttgcagcactttaacgtgtgggttcagagctcagcagagactaatgatggagtaagc
acacgtgtgatgatcttctcctcttttcgggaaagcgtccaggagatcgctagcatgcta
aaccgacacgcgccactgataagggtcatgacctttatgggccaagcctctgctgggaag
ggcgtcaaaggcttcacccaaaaggagcaactggaggtggtccacaggttccggcagggg
ggctttaacactctggtttctacctgtgtgggggaagaagggctggatatcggtgaggtg
gatctcatcgtgtgcttcgacgctcagaagaatcccatccgcctggtgcagcgaatggga
cgtaccggccgcaaacgacagggacgcattgttgtcatcctgacagagggacgggaggag
aggacctacaatcagagtcaaagcaacaagcgcagcgtgtacaagtccatcaccggcaac
agaaacgggttccgcatgtatcccagcagcccccgcatgctgcctgagggcatgaatccc
cagctgcataaaatacacatcacctcaggccagtttgaccacaaagagagcagcaggaag
tccgtcagaggtcgaaggtcccacactgcgggacggacttcactcatccaccctcagaac
ctcattcgacaggagagtcccacatcagacggctttctgagcagagcagaatattctctg
tggtcgtcgaccatgaggctggaagaacacgaggctcatccaactctgaagctgtcccac
ttcatgtccattcccagtgactcaacacctcaggaggcgacttccagggacaaaccacca
tccagagagctgtctttgtgggaatggagacactggcagcacaaactgcttcctttccat
gccgttgatcattccctccgctgccgccacttctctgcagtgatgcagctcatagacggc
atgagagatgagagtgagggggagtgtctttacgaacagcagcttcttccttacctccag
agtgatgatgctgatgcaaagaggcagaagaaaccaaaagccccaaagaattgctctaaa
accaataagagcaaaacgtctcactcatcccggtccgaactgaaatatatcgacgaggaa
gcagagatggaggatgcagcatcgcgattgatcccagagaaacagaggctcccagatgaa
cgcttgactgacgacttaaaccctgatcaggctgattctccgtcacacaactctgatgac
gactgcgtcatcgttaaccaaaccttcagagatcctgcaaatccaggcgatgttccagaa
gtgaatacaaaaaataatgaagacgatgatcttcaagagatgttctaccttcctaaaaca
tatcccgcactgctgtcgccaaaaacactcaagaaccagaacgacattcttgttaacgta
gctgagcttctctctcgatctccaccttcgccggagaacattttagaagcaggaaggact
ttgacgtgtcttccaccttcacccgagctgggcgatcaacctttccccgtcaggttcagc
ttggaagtggacgatgacgacgatgtagaggctggcattgaggacggcgagcctcatagt
cccacctgggatgaggttttcgaggatgaaaatatcagatacgacaagaaggaaatggac
ttaaaaagtgttgacgatgcagaggagtgtgtttccatggatgctgattgtgtgagtgaa
gacagagttcatgtccagatggatgagagcatggacttgtttgaagacgatgaggcgttc
atgcaaatgacaattccagatattcctactcctgaggatagcattacagccaaaacaacc
atcgatgatgaaggcattgagaagatttccaaagatgtagacaaagattgcacagaaata
ttaaacgttgtaaacaaagcccctttctcagacacaaggctaaacattcaaaccagccac
aactcaacagaagatcactacagcaaagtttcatttttagtgaaagcaaatcctgagcca
ctagattcctctcatgatctgttctctgttaattttgatctcggttattcgctggaagac
tctgaggatgaagcagaagtggaagttgcatcgccgtcgcctaaaaaacaagccaagtca
gctgtttctaattcctctactcctcgtcgcagctttgccagactcttcaaagagtccaag
tcatcttcacaaattaaaacggattattggaagtctaaaactgaggaactcccatctcca
attacattactgggacccagacagatgctcctgtctaggatcgcagaaccggactcttct
agagcgaagcaaaaacaagctgaaggtgattcactgcaagaactaatccatgtgggagag
tcttctcctcatccagcagagtgttgcagcgacagcgaagaggaagtcgtgcttctcaaa
agaagacatcacaaggtcaaccccttgtcttccccagaagtgtctaagagcctgagtgat
gtggactcacctgtggtggcaaagaagaaacgttcttctgtactgaatacgactgatgaa
actcaagccggagattttttggatgatgatttccagaactgctccatcttcatgcgaaga
aaaacaacaactggagccaagaggcaacaaatccagcagtccagcaacaagaaccccaga
ggtcagaaagcacgtcactttctggatgaagaggcagagctgtcagaagatgaagaggat
gtttcgtctgacgaagaggacggagcagatctgaatcggtccctggaaggcttcgttgtg
gacaacatgcacctttcccagggactgaatgactcagagatgcatgaagtttacttgaag
tctgtgagaagccctgcagtccggggaaaattcaaaatgtcttataaaaaccatcaaaac
atggatattttttctcaggtgcctgagatggatgagacgtatgcagaggacagctttgtg
gttggcagtgatgaagaggaggaggagagtaacgaggaagagcctgaagacgtcgaactt
ctgcccgacgtgtcgctcattgatgggagacggcagtacgcaaccagacggcgcattttc
ctgcacaaagccagagcgggactcgaaaccaatgccagaactcggcccgctgcagagcaa
agaaccagaaccaaacgctcgcgggtcgtctgcctgagcgagtccagcgaagaggagacg
gaggaagtgggcaaaaatcagaatccagatcccagcgggcggaaaacggtgtcctctgct
gttgctagcgtagcatctaaagtctcattattgagtaaagaacagagtgaagagcagcaa
aatgaaagacgtcgtcagaggttagagaatcaacatctgctctcggatgagctcgacttc
gcggagcaagagccgactttaataacaggacttccttccacgtcctcagcggctcagggg
tccgctgctcaggatccggttccgccggtgaccgagccgccgccgccgccgcctctcccc
gggtcggtcagcatcctggtggacagccgctgcaccggcggcatggtggagctggtgatg
agtctgcgtcagcgccacggggctgacgtccacgtctgctcgctggacagcaactactcc
atcgtgagcaaccgcatggcggtgatgaggcagagccaatcggatttggccgcgatgcag
aaccggaagcgactggcggagagattgagcaacatgcaggagttgtttgagagagtgtgt
ctgatagtggagaaagatcggtccaagcagggtgaagtttcccgccctttccagcgaacc
cgttactatgacaacactttagcggccctggtccgggccggggttcgcctgctgtggagc
gatggcgccgaggagagcgctgggttgttggcggacctggccaagctggagcaacgtaaa
ggtcagggcatcgcggtgcccctgaaggtcaaaggtcagcgcagggagcaggcactgcag
atgtacctgagtctaccttcggtcagccatgttcacgctctcaacctgctgcacaacttc
agctgcgtcgcacagctgatgaacggctccgttgagtcgatccagaaaggcggctgcatg
agccgatccagagccgaggagatctaccgcttcctgcgtcgctcctgtgactccgcccac
ttcaccaaaacacccaaagctggaaaaaacggctag
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