Xiphophorus maculatus (southern platyfish): 102227364
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Entry
102227364 CDS
T02923
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04150
mTOR signaling pathway
xma04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102227364 (lrp6)
04150 mTOR signaling pathway
102227364 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102227364 (lrp6)
Membrane trafficking [BR:
xma04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102227364 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
102227364
NCBI-ProteinID:
XP_014328250
Ensembl:
ENSXMAG00000002781
LinkDB
All DBs
Position
17:complement(1755196..1774628)
Genome browser
AA seq
1610 aa
AA seq
DB search
MGMCLRILLLLGSCWLVSGEPLLLYANRRDLRLVDAARDKANATVVVGGLEDAAAVDYVY
AQGLIYWSDVSEEAIKRTSFNRTGAGAAQTVVPGLAAPDGLACDWLGLKLYWTDSDTNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEVPKIERAGMDGTNRSLLVDQ
DIHWPNGLTVDYGQQKLYWADAKHNFIHRCNLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCRKQTGRDQRIVHSHIFSPMDLHVFSPKRQPVSRSSPCSHGNAGCSHLCL
LSPSRPFYRCACPTGVQLLEDGQTCRDGATQMLLLARRTDLRQISLDTPDFTDVILQVDD
IRHAIAIDYDPVDGYVYWTDDDVKAIRRARLDGSDAQFVVTSQVSHPDGIAVDWIARNLY
WTDTGTDRIEVTRLDGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDG
LERLVMVNTSLGWPNGLALDYEQRQIYWGDAKTDKIEVMNMNGTGRRVLVEDKLPHIFGF
SLLGDFVYWTDWQRRSIERVHKRTAEREFIIDQLPDLMGLKATHLHRAAGTNPCADSNGG
CSHLCLHTPQGVRCGCPNGLELLGDLQSCIVPEAFLLFSRHTDIRRISLETNSNTMAIPL
TGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVQFGLDYPEGMAVDWLGKN
LYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPVEGYMYWTEWGGKPKIDRAAM
DGTGRITLVSNVGRANGLTIDYAERRLYWADLDTTLIESSNMLGKEREVIADDLPHPFGL
TQYQDYIYWTDWSHRSIERANKTSGQNRTLIQGHLDYVMDILVFHSSRQAGWNACASTNG
HCSHLCLAVPSSFVCGCPAHFSLNLDNKTCSAPTAFLLFSQKAAINRMVIDEQQSPDIVL
PIQNLKNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQTVTVVSSSLLGPFDLSIDIFS
RFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLQDRSPKIER
AALDGTEREVLFFSNLGKPVALAVDNEAGKLFWVDSDLRRIESSDLSGANRIVIADSNIL
QPVGLTVFGKHLYWIDKQQQMIERIDKTTREDRTKVQARVASLSDIHAVHEIDMNEYRNH
PCTRDNGGCSHICIVKGDGTTRCSCPVHLVLLSNELTCGEPPTCSPDQFACVSGEVDCIP
NTWRCDGFPECDDHSDEKECPVCSESEFQCDSRQCVGQSERCNGEVNCQDGSDENKCEDD
PVRCLADQFSCANGQCIGIHQKCDHNTDCSDNSDEMDCYPPELPAPTNSTISSIVAVVMA
LFVVGAIYFVCQRVLCPHMKDDGETVANDFVVHGQASVPLGYVPHPGSLSSSLPGMSRGK
SVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQYTLEFG
YSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRPLKSAAVKGYTSDLNYD
SEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtgtcttcggatcctgctgctgttgggttcctgctggctcgtctcaggcgag
ccgctgctgctgtacgccaaccggcgggaccttcgcctggtggacgcggcgcgcgacaag
gccaacgccacggtggtggtgggcggcctggaggacgccgccgccgtggattacgtctac
gcccagggcctcatctactggagcgacgtcagcgaggaggccatcaaacggacctccttc
aaccggaccggcgctggcgccgcccagaccgtggtgccgggcctggccgcgccggacggc
ctggcctgcgactggctgggcctcaagctgtactggaccgactcggataccaaccggatc
gaggtggccgagctggacgggtcgctgaggaaggttctgttctggcaggagctggaccag
cccagagccatcgccctggacccggagcgagggttcatgtactggacggactggggcgag
gtcccaaagatcgagcgggccgggatggacgggaccaaccggtccctgctggtggaccag
gacatccactggcccaacgggctgacggtcgactacggccagcagaagctctactgggcc
gacgccaagcacaacttcatccaccgctgcaacctggacggctcctccagagaagtggtg
gttaaaggggagctgcctcaccccttcgccctcaccctgtacgaggacactctgttctgg
accgactggaacacacactccatccactcctgcaggaagcagacgggtcgggaccagcgc
atcgtccactcccacatcttctccccgatggacctgcacgtcttcagccccaagaggcaa
cccgtctcgcggagcagcccctgctcccatggcaacgcgggatgctcccacctctgcctg
ctgtcccccagccggcccttctaccgctgcgcctgtcccaccggagtccagctgctggag
gacggacagacctgcagagacggtgcgacccagatgctgctgctggcccggcggactgac
ctgcgtcagatctccctggacacgcccgacttcaccgacgtcatcctgcaggtggacgac
atccggcacgccatcgccatcgactacgacccggtggacggatacgtctactggacggac
gatgacgtgaaggccatccgccgcgcgcgcctggacggcagcgatgcccagttcgtggtc
acctcacaggtcagccacccggacggcatcgccgtggactggatcgcccggaacctgtac
tggaccgacacggggacggaccgcatagaggtgacccgtctggacggaaccatgaggaag
atcctgatctccgaggacctggacgagcccagagccatcgtcctggacccggtggccggg
tacatgtactggacggactggggcgaggttccgaagatcgagcgggccgacctggacggg
ctggagcggctggtgatggtgaacacgtcgctgggctggcccaacggcctggcgctcgac
tacgagcagcggcagatctactggggagacgccaagacggacaagatcgaggtgatgaac
atgaacgggacgggccgacgggtgctggtggaggacaaacttccccacatcttcggcttc
agcctgctgggcgacttcgtctactggacggactggcagcgccgcagcatcgagcgcgtc
cacaaacgcaccgccgagcgcgagttcatcatcgaccagctgcccgacctcatgggcctg
aaggccacgcacctgcaccgcgccgccgggaccaacccgtgcgctgacagtaatggcggc
tgcagccacctgtgcctgcacacgcctcagggcgtgcggtgcggctgcccgaacggcctg
gagctgctgggcgacctgcagagctgcatcgtcccggaggccttcctgctcttctcgcgc
cacaccgacatccgccgcatctccctggagaccaacagcaacaccatggccatcccgctc
accggcgtcaaggaggcctccgccctcgacttcgacatcaccgacaaccgcatctactgg
accgacatcacgctcaagaccatcagccgggccttcatgaacggcagcgcgctggagcac
gtggtccaattcggcctggattacccagaaggcatggcggtggactggctgggcaagaac
ctgtactgggccgacaccggaaccaaccgcatcgaggtggccaagctggacgggcagcac
cgccaggttctggtctggaaggacctggacagcccgcgggccctggcgctggacccggtc
gaggggtacatgtactggaccgagtggggcgggaagcccaagatcgaccgggccgccatg
gacggaaccggccgcatcacgctggtgtcaaacgtgggccgggccaacggactcaccatc
gactacgctgagcggcgcctgtactgggccgacctggacaccacgctcatcgagtcctcc
aacatgctgggcaaggagcgagaggtgattgccgacgacctgcctcacccgttcggcctc
acccagtaccaggactacatctactggacggactggagccaccgcagcattgagcgggcc
aacaagacgagtggccagaaccggaccctgatccagggacacctggactacgtgatggac
atcctggtgttccactcgtcccggcaggccggctggaacgcctgtgcctccaccaacggc
cactgctcccacctgtgcctcgccgtgcccagcagctttgtctgcggatgccccgcccac
ttctcgctcaacctcgacaacaagacgtgcagcgctcccacggcgttcctgctcttcagc
cagaaggcggccatcaaccgcatggtgatcgacgagcagcagagccccgacatcgtcctg
cccattcagaacctgaagaacgtccgggccattgactacgacccgctggacaagcagctg
tactggatcgactccaagcagaacgtcattcgccgcgcccaggaggacggcaaccagact
gtgacggtggtgtccagctcccttctcggaccctttgatctcagcatcgacatcttcagc
cgattcatctactggaccagcgaggtgaccaacgtcatcaacgtgacccggacggatggc
agccgggtcggcgtggttctgcggggcgagcacgacaagccgcgggccatcgtggtgaac
ccagagagagggtacatgtacttcaccaacctgcaagaccgctcacccaagattgagcgg
gcagcgctggatgggacggagcgcgaggttctgttcttcagcaacctgggaaaacctgtg
gcgctggctgtggacaacgaggcggggaaactgttctgggtcgactcagatctgcgccgc
attgagagcagcgacctgtcaggagccaatcggattgtgatcgcggactcaaacatcctg
cagccggtgggcctgacggtgttcgggaaacacctgtactggattgacaagcagcaacag
atgatcgaacgcatcgacaagacgacgagggaggaccgcaccaaggtccaggcgcgggtc
gcctccctgagcgacatccacgccgtgcacgagatcgacatgaacgagtaccgaaaccat
ccttgcacccgggacaacggcggctgctcccacatctgcatcgtgaagggcgacggaacc
acgcgctgctcctgccccgtccacctggtgctgctgtccaacgagctcacctgtggagaa
ccgcccacatgctcacccgatcagttcgcctgcgtctccggagaggtggactgcatcccc
aacacctggaggtgcgacggcttccccgagtgcgacgaccacagcgacgagaaggaatgt
cccgtctgctccgagtccgagttccagtgcgacagccggcagtgcgtggggcagagcgag
cgctgcaacggggaggtcaactgccaggacgggtccgacgagaacaagtgtgaagatgat
ccagtccggtgtctggcggaccagttctcctgcgccaacggccagtgcatcgggatccac
cagaagtgcgaccacaacacggactgcagcgacaactcggacgagatggactgctacccg
ccggagctgccggcgccgaccaacagcaccatcagctccatcgttgccgtggtaatggcg
ctgttcgtagtgggcgccatctacttcgtgtgccagcgcgtcctctgcccccacatgaag
gacgacggcgagacggtcgccaacgacttcgtggtccacggccaggcctcggtgccgctc
ggatacgtgccgcaccccgggtcactgtccagctcgctgccgggtatgtccagagggaag
tctgtgattggctccctgagcatcatgggcggcagcagcggccctccgtacgaccgcgcc
cacgtcaccggagcgtcatccagcagctcctccagcaccaagggcacctacttccccccg
atcctgaacccgccgccgtcgcccgccaccgtccgctcccagtacaccctggagttcggc
tactcctccaacagcccctccacccaccgctcctacagctaccggccctacacctaccgc
cactttgccccgcccaccacgccctgtagcaccgacgtctgcgacagcgactacacgccg
ggccgccggccgctcaaatccgccgccgtcaagggctacaccagcgacctcaactatgac
tcggagccgttcccgccgccgcccacaccgcgcagccagtacctgtcggcggaggagaac
tgcgaaagctgcccgccgtcgccgtacacagagcgcagctactcccaccacctgtacccg
ccgccgccgtccccgtgcacggactcctcgtga
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