Xiphophorus maculatus (southern platyfish): 102229321
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Entry
102229321 CDS
T02923
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03013
Nucleocytoplasmic transport
xma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102229321
03015 mRNA surveillance pathway
102229321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102229321
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102229321
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102229321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
PP-binding
Motif
Other DBs
NCBI-GeneID:
102229321
NCBI-ProteinID:
XP_005798031
Ensembl:
ENSXMAG00000018853
UniProt:
M4AWR1
LinkDB
All DBs
Position
20:23570710..23580531
Genome browser
AA seq
488 aa
AA seq
DB search
MASESWAQAVDEQEAAAESINSLQIKEKPEENGTVSNATDSSSGAAKSEAEREAKPADDD
DKEDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKYYPEVKLVYAIRGNKLERGSKLQEQIVIGTPGTMLDWCNKFRFI
DPKKIRVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIVPE
PNIIKLKREEETLDTIKQYFVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIERLDTDDL
DEIEKIAN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagtcttgggcgcaggccgtggatgagcaggaagccgcggcagaatcgatt
aatagtcttcagataaaagagaaaccagaagaaaatggtaccgtttcaaatgccacagac
tccagcagtggggctgcaaaatcagaagctgaacgtgaagccaaacctgcagatgacgac
gacaaggaggacaaagcagcacaatcgctgttgaacaagctgatacggaataatctcgta
aatacgacaaatcaagtggaagttctccagaaggatccaaactccccactatactctgtg
aagtcctttgaagagctacgcctcaaaccacagcttcttcagggtgtatatgccatgggg
ttcaatcgaccatctaaaatccaagagaccgccttacccatgatgctggcagagcctcca
cagaacctgattgcccagtctcagtcagggacaggaaaaacggccgcctttgtcctggca
atgctcagccacgtcgaccccaacaacaaatatccccagtgcttgtgtgtgtcaccaaca
tacgaactggcacttcagaccggcaaagttattgaacagatgggcaaatattatcctgaa
gtcaaactagtctacgccattagagggaacaagttggaacgaggcagtaaactgcaggaa
cagatagttattgggacacctggtacaatgctggactggtgcaataaattccggtttata
gatcccaagaagatcagagtgtttgtgttggacgaagccgacgtcatgatcgccacgcag
ggacaccaggaccagagtatccgaatccagaggatgctgccgaagaactgccagatgttg
ctgttctcagctacgtttgaagagagcgtttggaacttcgcgcagcgcatcgtgcccgaa
cccaacatcatcaagctgaagagagaggaggagactctggacaccatcaagcagtacttt
gtgctctgcaacagcagagaggagaagttccaagctctctgtaacatctacggagccatt
acaattgctcaggccatgatcttctgccatacgaggaaaactgcaggttggcttgcaggg
gagctgtccagagaaggccaccaggtggcgctgctcagtggagaaatgcaagtagagcag
agagctgcagtcatagaccgcttccgagatggaaaggagaaagtcctggtgaccacaaat
gtctgtgctcgaggcattgatgtggagcaggtttctgtggtgatcaatttcgacttgcca
gtcgacaaagatggtaaccctgacaacgagacatacctgcacaggattgggcgtaccggc
cgatttgggaagaggggactggccatcaacatggtggacagtaagatgagcatgaacatc
ctcaacaggatccaggagcatttcaataagaaaattgaaagactagatacagatgatctg
gatgaaattgagaaaattgccaactaa
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