Xiphophorus maculatus (southern platyfish): 102229992
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Entry
102229992 CDS
T02923
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
102229992
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102229992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
MRP-S31
Exonuc_VII_L
Gp58
Motif
Other DBs
NCBI-GeneID:
102229992
NCBI-ProteinID:
XP_005796692
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Position
4:complement(3959153..3961712)
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AA seq
554 aa
AA seq
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MEQNQLDRETFSCLICLDLLKDPVTTSCGHSYCMNCIKTHWDEEDRKRIHSCPQCRETFI
PRPVLKKNTMLAALVEQLKKTGLQAAPADHRYAGHEDVACDFCTGRKLKAIKSCLFCLAS
FCEKHLQPHYDSAAFKKHKLVEPSKNLQENICSKHDEVMKMFCRTDQKCICLICLMEEHK
GHDTVSAAVERTERQRELEERRGNIQQRIQDREKDVKLLQQEVEAINRSADKTVEDSEKI
FTELIRLLQKRSSDVKQQIRSQQKTEVSRVKDVQEKLEQEIPELKRKDAELEQLSHTEDH
NQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVT
EVDVLLSEPEPKSRAGFLKYSCEIILDPNTVHTELGLSEGNRKVKLMSQRQSYSSHPDRF
TNWWQVLSRESLTGRCYWEVERCGTCVYISVAYKTISRAGCGNECGFGCNDKSWALECSQ
NSFSFGHNNIWTPISGPVSSRVGVYLDHRAGILSFYSITETMTLLHRVQTTFTEPLLAGV
WVGTGSSAEFWKPR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatcagctcgaccgagaaacgttctcctgtttgatctgtctggatctactg
aaggatccggtgactacatcctgtggacacagctactgtatgaactgtattaaaacccac
tgggatgaagaggatcgcaagaggatccacagctgccctcagtgcagggagacattcata
ccgaggcctgtgctaaagaagaacaccatgctagcagctttagtggagcagctgaagaag
actggacttcaagctgctcctgctgaccaccgctatgctggacatgaagatgtggcctgt
gatttctgcactggaagaaaactgaaagccatcaagtcctgtttattctgtctggcctct
ttctgtgagaaacaccttcagcctcattatgattcagctgcttttaagaaacacaagctg
gtggagccgtccaagaacctccaggagaacatctgctctaagcatgatgaggtgatgaag
atgttctgccgcactgatcagaagtgcatctgtctcatctgtttaatggaggaacataaa
ggtcatgacacagtctcagctgcagtagaaaggactgagaggcagagagagctggaggag
agacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatcgctctgctgataaaacagtggaggacagtgagaagatc
ttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcagaaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggag
atccctgagttgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
aaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacactcatcc
agcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctc
agagagaaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcact
gaggtggatgttttactgtcagaaccagaaccaaagagcagagctggattcctaaaatat
tcatgtgaaatcattttggatccaaacacagtacacacagagctgggactatcagagggg
aacaggaaggtgaaactgatgagtcaacgtcagtcttattctagtcacccagacagattc
actaattggtggcaggttctgagtagagagagtctgactggacgttgttactgggaggtg
gagaggtgtgggacatgtgtttatatatcagttgcatacaagactatcagcagagcagga
tgtgggaatgaatgtggatttggatgtaatgacaaatcgtgggctttagagtgttcccaa
aacagttttagttttggtcacaacaacatctggacccccatctcaggtccagtttcctcc
agagtcggagtgtacctggaccacagagcaggtattctgtccttctacagcatcactgaa
accatgactctcctccacagagtccagaccacattcactgaaccgctactggctggagtt
tgggttggtactggatcctctgcagagttctggaaacccagatag
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