Xiphophorus maculatus (southern platyfish): 102234992
Help
Entry
102234992 CDS
T02923
Symbol
clock
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102234992 (clock)
03036 Chromosome and associated proteins [BR:
xma03036
]
102234992 (clock)
Enzymes [BR:
xma01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
102234992 (clock)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102234992 (clock)
Chromosome and associated proteins [BR:
xma03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
102234992 (clock)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
102234992
NCBI-ProteinID:
XP_005813323
Ensembl:
ENSXMAG00000016928
UniProt:
A0A3B5QCN7
LinkDB
All DBs
Position
9:22789454..22814870
Genome browser
AA seq
835 aa
AA seq
DB search
MTSSINRDDSSIFDGLMEEDEKDKAKRESRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYVSENVTSLLEHLPSDLVDQNLLNFLPSGEHSDVYKALSSHVTEGETLTPEYLKTKN
QLEFCCHMLRGTIDPKEPPVYEFVKFIGNFKSLNNVPNCNRNGFDGVIQRSLHSTFEDRV
CLIATVRLAKPQFLKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEDCPPEVAADKSQDSGSESQLNASSLKEALERFNHSRT
PSASSRSSHKSSHTAVSDPASSQMKMQGDRSTPGRQSVSAVEMTSQRRSSVSSQQSMSSQ
NTGQNGAPSMTSQQSQQLPQQQLQNNQSVQYSNQLEAMQHLKEQLEKKTRMIEDNIQRQL
DELRQIQVELERVHGQSLQMFQQKGDEGLNLSSAHSPHGTAGQQGATMSMQGQVVPPAAL
QNNMQQQQAVQTQTQSQQQTLLRDQSTVMSQSQRSTLTLQPQQNPLSGSLYNTMMIPQQS
QANMVQISTSLAQNTGPSNTAVATFAQDRSAQIRFPTAPQLLTKLVTGQIPMGAVMVPTS
MFMGQVVTAFAPQQGQTQTISISQQQEQQQQIQVQNQVSALQAGQASLAAQQPQFLQAPR
LLHGNQSTQLILQAAFPLQQHSTFSAAAQQQQHQHHQLAAHRSDSLSDRPSTQPQ
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagcattaaccgagatgacagcagcatttttgatgggttaatggaagaagat
gaaaaggacaaagccaaacgtgagtcccgtaacaagtccgagaagaagcgcagagaccag
ttcaatgtcctcattaaggagttgggcaccatgttgccaggcaacacccgcaagatggac
aagtccactattttgcagaaaagcatcgacttcctgcacaaacacaaagaaattgctgct
cagtcagaatcaacagagatcagacaagactggaagcctccgtttcttagtaatgaagag
ttcactcagctgatgctggaggccctggatgggtttttcctcgccataatgaccgacggg
aacataatctacgtttcggagaacgtgacgtctcttctcgaacacttaccatctgatctt
gtggatcagaaccttttaaactttctgccctcgggggagcactctgacgtgtacaaagct
ctgtcctcacatgtcacagagggagagactctaacgccagagtatctgaaaacaaagaat
cagcttgagttctgttgccatatgcttcgagggacaattgatcccaaggagccccccgtg
tatgaatttgtcaaattcataggaaacttcaaatctctcaataatgtgcctaactgtaac
agaaacggttttgacggggtgatccagcgatcgcttcactctacgtttgaggacagagtg
tgcctgattgcgactgtaaggctggccaaaccacagttcctcaaggagatgtgcactgtt
gaggagcctaatgaggaattcacctccaggcatagcttagagtggaaatttctcttcttg
gaccacagagccccgcccatcatcgggtacctcccattcgaagtcctgggtacttcaggt
tacgactactaccatgtagacgacctggagacactggccaaatgccacgaacacttgatg
caatatgggaaaggcaagtcgtgctactacaggttcctcaccaaagggcagcagtggatt
tggctgcaaacccattactacatcacataccatcagtggaactccaggcctgagtttatc
gtctgcacacacactgttgtcagctacgctgaagtacgagcagaacaacggcgagagctc
ggaatcgaagactgtccccctgaggtcgcagctgacaagtcccaggattcaggctccgaa
tcgcagctcaacgcctccagcctgaaagaagctctggagcgttttaaccacagccggacc
ccgtcggcctcatcgcgcagctcgcacaaatcctcccacactgccgtctctgacccggcc
tcttcacagatgaagatgcagggagatagaagtacaccaggccgacagtctgtctctgcc
gtggaaatgacatcgcagcggagatcatcagtcagcagtcagcagtcgatgagctcccag
aacacgggccagaacggggcgccttccatgacttcacagcagtctcaacagctgcctcag
caacagcttcaaaacaaccaatcggtgcagtactctaaccagctggaagccatgcagcac
ctgaaggagcagctggagaagaagaccaggatgatcgaggacaacattcagcggcagctg
gatgagctgcggcagatccaggtggagctggagagggtccacgggcagagtctgcagatg
ttccaacagaaaggggatgaaggactgaacctcagctcagctcattcgcctcatggcact
gctggccagcagggggcgacaatgagcatgcaaggccaggtggtccctccagcagctcta
cagaacaacatgcaacagcagcaggcggttcaaacccaaacccagtcccagcagcaaaca
cttctgagggaccagagcacagtgatgtcacagtctcagcgctcaacattaactctgcag
cctcaacagaatcctctctccggctccctctacaacactatgatgataccacagcagagt
caagctaacatggttcagatttccacaagcctggcgcaaaataccggacccagcaacact
gccgtggcaacatttgcacaggatcgttctgctcagataaggtttcctacagctcctcag
ctgctgactaagctggtcacaggacagatcccaatgggggcggtcatggtccccacatcc
atgttcatgggtcaggtggtgacggcctttgctccccagcagggccagactcagaccatc
agcatttctcagcagcaggagcagcagcagcagattcaggtgcagaaccaggtttccgcg
ctgcaggcaggtcaggcttctctggccgcgcagcagccgcagtttctgcaggctcctcgg
ctccttcacggaaatcagtcgacccagctaatcctccaggcggcgttccctctgcagcag
cacagcaccttctctgccgcagcgcaacagcagcagcaccagcatcaccagctggctgct
caccggtcagacagtctgtctgaccgcccgtccactcagcctcagtag
DBGET
integrated database retrieval system
