Xiphophorus maculatus (southern platyfish): 102235339
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Entry
102235339 CDS
T02923
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102235339
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102235339
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102235339
NCBI-ProteinID:
XP_005809129
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All DBs
Position
5:complement(10981313..11031532)
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AA seq
457 aa
AA seq
DB search
MLMSTDVASIMLPVSRALIDRDRELETMAGVHANPSGAPGAVRGMKRGDPEPDGQTAAAL
VDSTGAECKRPRIDGSGGIGEIGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLTLDYGSSLYAAGAVQGPVEAGGAGNSAANPGNSLSQSDGSSQIDGQS
VVGSGGGGGGGGPGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER
GSKGFGFVTFETSSDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYANGEGLAA
LPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAAASTAATFRGTHLRGRARPVYSAV
RAAVPQPAIPAYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSY
GRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccgggctctcatagac
cgggacagggagctggagaccatggccggggttcacgccaacccgtccggtgctccagga
gccgtgcgaggcatgaagcgcggagacccggagcccgacggacagacggcggccgctctg
gtggactccactggggctgagtgcaagcgccccagaatcgacggctcaggagggatcggc
gagattggacagaacaacgatcctttgaccctcggctaccatggatacccatctcacagt
cagggctctcaggatagtgctggcggtcaggaaggactcgtacccccacccttctccgcc
ttcccacctcctccgcctccgcctcctcagaacggcctgactctggattacgggagcagc
ctgtatgcagccggagcggtgcagggccccgtggaggctggtggagcaggcaacagcgcg
gccaaccccggcaatagcctcagccagtctgatggctcctctcaaattgacgggcagtct
gtagttggctcaggtggagggggcggcggcgggggccctggggatgattcggacgccaag
gggacgcccaaacgtctccatgtgtctaacatccccttccgcttccgagaccccgaccta
cggcaaatgtttgggcaatttggcaaaatccttgatgttgagatcattttcaacgagagg
ggatccaagggcttcgggtttgttacatttgagaccagctcagatgcagagagggccagg
gagaagctccacggcacgctggtggaaggacgtaaaatcgaggttaataatgccacagcc
agagtgatgacaaacaagaaaatgaccacaccatatgctaatggagagggccttgcagca
cttccatatgctggttggaagttaagtcctatggttggagccatgtacagtcctgagctc
tatacagttccagggttcccgtacccggcagcagcagcagcagcggctgctgcttccact
gctgcgacctttcgaggaacgcatctgcggggtcgagctcggcctgtctacagcgcggtc
agggctgccgtcccacaacctgccatcccagcataccctggtgtgatggcctatcaggat
ggtttttacggtgcagctgacctctatggcggctatgcagcgtatcgttatgcccagccg
gctgctgtagcgactcctgcagcagcagccgctgcagcagcagcttacagtgacagctac
ggacgagtttacacggcagatccctaccatgctgcactggccccagcagcctatggtgtt
ggagccatggccacgctctacaggggaggctacagcagatttgccccttattaa
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