KEGG   Xiphophorus maculatus (southern platyfish): 102235383
Entry
102235383         CDS       T02923                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102235383 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xma03041]
    102235383 (sf3b4)
Spliceosome [BR:xma03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102235383 (sf3b4)
 Complex B
    102235383 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    102235383 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 102235383
NCBI-ProteinID: XP_005797453
Ensembl: ENSXMAG00000003772
UniProt: M3ZNJ6
LinkDB
Position
13:1385709..1388961
AA seq 391 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPTPVLTAMGTGIPIPGLPPP
GAFPPVPPPGTMPPAMPPSMGMPPTAGGVPPGSAGGPPPGPPPFPPGNMPPGMPQMPMPP
PAPPGMVPPPPAPPGSAQRAPLPPNMPPPPMGMPPRAPYPMAPPVPPGMRGPPPPMPPPG
YGAAPPRPPPFGFQRAPPMPPRPPGAPPRVP
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcagcgggaccaatttcggaaagaaatcaagatgcgactgtgtatgttggaggcttg
gatgagaaagtgtcggagccgttactgtgggagctgttcctgcaggccggtcctgtggtc
aacacacacatgcccaaagaccgggtcactggtcaacatcaaggttatggctttgtggag
tttcttagtgaggaggatgctgattatgccataaaaatcatgaatatgataaaactctat
ggcaaaccaattagggtcaataaggcctcagcacacaacaaaaacctggacgttggtgca
aacatcttcatcggtaatttggacccggagattgatgaaaaacttctctacgacacgttc
agtgcgtttggtgtgatcctccaaacaccgaagatcatgcgagaccccgacacaggcaac
tctaagggttacgctttcatcaattttgccagttttgacgcttcggacgcggctattgag
gccatgaacggccagtacctctgcaacagacccattacggtgtcgtacgcatttaaaaag
gattccaaaggggaacgccacggttcggccgcagagcgactgctggctgcacagaacccg
ctctcccaggccgacaggccgcaccagctgttcgcagatgctccgcccccgccgtctgca
ccaacaccagtcctcactgcgatgggaacaggaattcccattccaggtctcccgcctcct
ggtgcgtttcctcctgttccccctcctggaacgatgcccccagcaatgccgccttcgatg
ggcatgcctccaacagcaggaggtgttccgccagggtctgccggtggacctccacctgga
ccgccaccgttccctcctggcaacatgcctccaggtatgcctcagatgcccatgccacct
cctgctcctcctggcatggtgcctccacctcctgctcctccaggatcggctcagagggct
ccgctgccccccaacatgccgccaccaccaatgggcatgcctccccgggcaccatacccc
atggctcctcctgtgcctccaggtatgcgagggcctcctcctcccatgcctccgcctggc
tacggcgcggctcctcctcgtccgcctccttttggttttcagagagctcctccgatgcca
cccaggcccccaggtgcccctcctcgggtgccttaa

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