Xiphophorus maculatus (southern platyfish): 102237337
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Entry
102237337 CDS
T02923
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102237337
Membrane trafficking [BR:
xma04131
]
Protein recycling
Others
Others
102237337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
102237337
NCBI-ProteinID:
XP_023189466
Ensembl:
ENSXMAG00000010459
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All DBs
Position
5:1177656..1342301
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AA seq
1275 aa
AA seq
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MQLLPLRAGLHFVKSFNLDHLGSVALWTPPHLAPTPQLAAVSLPHRAQNLPERQTDSQHL
LHPVLPPAMETEVRFCPKWHGALRFGLFFLLRGLVGVAEAEITCRSCRDGNMWYGAQELL
LRVETSGPAAGVMGEVLGSGDRTGRVPCEPGPAGCAPDRGQQAQLRRERITDSGKVSQHR
DGVGSTPRRFRRDSGGDAVSSAPAEGAAAAAAGRRAARWSGEERRAAGARQDDLKLNSST
FALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKV
GAKTILSYLYVSPNNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYILSLLFHPEQE
DWILAYSHDQKLYSSVEFGRRWQLVHEKVAPNRFYWSKMGLDKEPGLIHLETSISEGQAL
YVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDVFTPMKL
PKYTLPKELHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGLEGN
VMVDLYEVAGIKGMFLANKKTDNQVKTYITYNRGRDWRLLQAPGRDLRGSSIHCVLPYCS
LHLHLHVSANPYTSGNIASRESAPGIIVASGSIGSELTTSNVSAFITSDAGNTWRQIFDE
EYAVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRQWNKYSFSNTPLFVDGVLGEPGEETL
IMTIFGHFSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPT
SRCVMGKSYSVAMTSAPCDCTEADFECDYGYERRTDGKCSPAFWFHPASMSRSCTTGMTF
LNSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGRLTATLGANVTFLVFL
EEGDGARTSITVDFGDGHALTYSNVSSIEDGIKHIYKSVGIYRVTATGENSLGSETATLF
LHVTCQLEHIHLSAPFVAVRNKEVNLTAVLHPSQVGTVTYIWWIGNNTEQPVITLEGSVA
CTFSREGINTVTVQVSAGNAILQDRKTIAVHDYFRSHLLAFSANLDEHNPDVAEWRQDVS
RVIRNALIQATGVREDLLLVSILPGLPTAAEFFLLPDKQLTEGKAEKSSAHLDQLSDLLL
NALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVAGLAVFVIYK
FKRKIPGLNVYAQMQNDKEPEMMSPANPSEATPSSPQDLVPSLEILDTELNSRPIGCMKP
HVHVKFSTELPTFIV
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcctccctctgcgcgcggggcttcatttcgtcaaatccttcaacttggaccac
ttaggctcagtcgcactttggactccaccgcatttggctccaacgccgcaacttgcagca
gtttctcttccacatcgagctcagaacctcccggagaggcagacagactcccagcatctg
ctgcatcctgttcttcccccagcgatggagacggaggtcaggttctgcccaaagtggcac
ggcgcgctccggttcgggctcttcttcctcctgcgcggcttggtcggcgtcgccgaggct
gagataacctgcaggtcatgccgggatgggaatatgtggtacggcgcgcaggaattactg
ctgagggttgaaacaagtggtcccgctgccggggtaatgggggaagttttggggagcgga
gaccggaccggaagggtcccctgcgagccgggccccgctggttgcgctccggaccggggg
cagcaggcgcagctgaggcgggagcggattacagacagcgggaaagtttcccaacacagg
gacggtgttggttcgactccacggcgcttcaggagggacagtggcggggatgcagtcagc
tcagccccggcagagggagcggcggcggcggcggcggggcgcagagcggcgcgctggagc
ggagaggagcgcagagcggccggcgcgcggcaggacgacttaaagctcaacagctccacg
ttcgccctgaccggggactcatcccacaaccaggccatggtgcactggtccggccagaac
agcagcgtaattctgatgctaaccaaactctttgacttcaacctcaacagtgtgactgag
agttcattatggaggtcaactgactatggagcaacgtaccagaagctgaacgacaaagtg
ggagcgaagacgatcctcagctacctgtatgtgagccccaacaacaagagaaagatcatg
ctgctgacggatccggagatagagagcagccttctgatcagctctgatgaaggagccaca
taccagaagtaccgactcaacttctacatcctgagcctcctgtttcaccctgaacaggag
gactggatcctggcatacagccacgaccaaaagctttacagttctgttgagtttggaaga
agatggcagctggtgcacgagaaagtggctcctaatcgtttctactggtccaagatgggt
ttggacaaagagccgggcttaattcacctggaaaccagcatctctgaaggacaggcgctg
tacgtcacctgcaagctgcagaactgcacagacgccaacaagggcaaaccattccccgga
tacattgaccccaattccctggtggtgcaggatgagtatgtgtttgtccaggtgtccact
gcaggaaggccggtctactacgtttctgcaaaacgagacgtctttaccccaatgaagctg
ccaaagtacaccctgcccaaggagctgcatgtgatcagtacagatgaaaaccgcgtggtg
gctgctgttcaggagtggaaccagaatgaaacctacaacctgtacgtgtcggacacttcg
ggcgtctactacactctggctctggagaacgtggtcagcagcatgggcctggagggcaac
gtcatggtggacctctatgaggtggcaggaataaagggcatgttcctcgccaacaaaaag
actgataaccaagtaaagacatacatcacctataaccgcggcagagactggaggttactg
caggcccctggcagagacctgagaggcagcagcatccactgtgtgctgccgtactgctca
ttacatctccatcttcacgtgtctgccaacccctacacatctggaaacatcgccagcagg
gagtcggcgccggggatcatcgtggcctcaggctccatcggttcagaactgaccaccagc
aatgtgagcgcgttcatcacctctgatgcaggaaacacgtggagacagatctttgatgag
gagtacgccgtgctttatctcgaccaaggtggagccttggtggcaataagacacactcca
cttcccatccgacacctatggttgagcttcgatgaaggacgacagtggaacaagtacagc
ttctccaacacacctctgtttgtggacggggtgctgggcgagccgggcgaggagacgctc
atcatgacgatctttgggcacttcagtcatcgctctgagtggcagctggtgaaaatagat
ttcaggtccatcttcaacaggagatgcacggaggcggactaccagacgtggcacctacac
aaccagggtgagccgtgtctgatgggcgtgaagagaatctaccggaagctgaagccgacc
tccaggtgcgtcatgggaaagtcgtactccgtggcgatgacctcggctccctgcgactgc
acggaggcggacttcgagtgtgattatggctatgagaggcggactgatgggaagtgcagc
cccgccttctggttccatccggcctccatgtcccgcagctgcaccacgggaatgactttt
ctcaacagcacgggctacaggaaggtggtgtccaataactgcacagcaggagtgatagca
gagtacacggcccggcgacagcactgccccacccaggctcccaaaggcctccacctggtc
accagcgagggccggctgaccgccacgctgggcgccaacgtcaccttcctggttttcctg
gaggagggagacggagcgaggaccagcatcacggtggactttggagatggtcacgctctg
acgtactccaacgtgagctccatcgaggacggcatcaagcacatctacaaatccgtggga
atctaccgggtgacggccaccggggagaacagcctcggttctgagaccgccacgctcttc
ctgcacgtcacatgtcagctggagcatatccatctctctgctccctttgtggcggtgagg
aacaaggaagtgaacctgaccgccgttctgcatcccagccaagtgggaacggtcacctac
atctggtggatcggaaataacaccgagcagcctgttatcaccctggagggaagcgtggcg
tgtaccttctccagggaagggatcaatacagtcacggtgcaggtgtctgctgggaacgcc
atcctgcaggacaggaaaactatcgctgtccacgattatttccgatcccacctgctggcc
ttctccgccaacctggatgaacacaacccggacgtggctgagtggaggcaggatgtgagc
cgggtgatccggaacgctctgatccaggcgacaggcgtgcgggaggacctgctcctggtc
tccatcctgccaggtttaccaacagcagccgagtttttcctgctgcctgacaagcagctc
accgaggggaaagcagagaagagctcggctcatttagatcagctctctgacctcctgctg
aacgccttgaatcagaacctggtccagttcacgctgcggccgggggtccaggtcaccgtg
tacgccgctcacctgtctgcagcgcccctggtggacaccagcgagaaccacagtggctct
gccatgctaatgctgctctctgtagtggttgcgggtttagctgtgtttgtcatctacaaa
tttaagaggaagatcccaggcctcaacgtctatgcgcagatgcagaacgacaaagaacca
gaaatgatgagtccagccaatccctcagaggccacgcccagctcaccgcaggacttggtg
ccttctctggagattctggacaccgagttgaactcgcggcccatcggatgtatgaaacct
catgtacatgtgaaattctccacagaactccccacattcatcgtctga
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