Xiphophorus maculatus (southern platyfish): 111608533
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Entry
111608533 CDS
T02923
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
111608533
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111608533
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-RING_6
TRAF3_RING
LMBR1
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
111608533
NCBI-ProteinID:
XP_023189077
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Position
5:29439673..29442522
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AA seq
553 aa
AA seq
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MAQTGVQLYREKFSCSICLDLLKDPVTTSCGHSYCMSCIKDHWDVEDQKGIHSCPQCRKT
FNRRPDLQKNTLLAELVEDLKKTGLRHALADHCYAGPGDVACDVCTGRKMKAVKSCLVCL
ASYCEDHLQPHYESHAFKKHKLVKASVELQRNLCSRHDEVMKIFCRTDQQSICYLCTMDE
HKGHVTVPAAAERTEKQKELQVRRQQIQQRIQDREEDMKLLQQEVEVINVSADKTVEDSE
KIFTELMHLLQKRSSEVKQRIRSQQETEVNRVKDVQEKLEQEISELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSSSIDICPLRHFEDVTAAVSELREKLQDVLRDMWTNVPLT
VPLVDVLLSEPEPKTRKDFLKYSKRITLDPNTANTHILLSEGNKKGTLTKEMQFHFDHPD
RFSYCQVLSRESLTGRCYWEVQWSGRRVDVAVSYKSISRSGQECEFRSNDKCWSLYCCTD
WYICWHNRVGNLISVPVSSRVGVYVDHRAGVLSFYRVSGTMTLLHRVQTCFTEPLHAGVG
FYDIGDSAKFIGL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacaggagttcagttgtatcgggaaaagttctcctgttccatctgtttggat
ctactgaaggatccggtgactacatcctgtggacacagctactgcatgagctgtattaaa
gaccactgggatgtagaggaccagaagggaatccacagctgtcctcagtgcaggaagact
ttcaatcgcagacctgacctccagaaaaacaccctgttagcagagttagtggaggacctg
aagaagactggactccgacatgctctggccgaccactgttatgctggacctggagatgtg
gcctgcgatgtctgcactgggaggaagatgaaagctgtcaagtcctgtctggtttgcttg
gcctcatactgtgaggatcacctccaacctcactatgaatctcatgcttttaaaaaacat
aaacttgttaaagcttctgttgaacttcagcggaacctctgcagtcgtcatgacgaggtg
atgaagatcttctgtcgtactgatcagcagtccatctgttacctctgcactatggatgaa
cataaaggccatgtaacagtgccagctgcagcagaaaggactgagaagcagaaggagctc
caggtgaggcgacaacaaatccagcagagaatccaggacagagaggaagacatgaagctg
cttcaacaggaagtggaggtcatcaatgtctctgctgataaaacagtggaggacagtgag
aagatcttcactgagctgatgcatctcctccagaaaagaagctctgaggtgaagcagcgg
atcagatcccagcaggaaactgaagtgaatcgagtcaaagatgttcaggagaagctggag
caggagatcagtgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tcatccagcatcgacatctgtcctctgagacactttgaggacgtgacagcagctgtgtca
gaactcagagagaagctacaggacgtcctgagggacatgtggacgaatgtcccactgaca
gtccccctggtggatgttctcctgtcagaaccagaacctaagaccaggaaggacttcttg
aaatattcaaaaagaatcactctggatccaaacacagcaaacacacatatattattatct
gagggaaacaagaaaggaactttgacgaaggaaatgcagtttcattttgatcatccagac
agattctcttattgtcaggtcctgagcagagagagtctgactgggcgctgttactgggaa
gtgcagtggagcgggagaagagttgatgtagcagtttcatacaagagcatcagcaggtca
ggacaagaatgtgagtttcgaagcaatgacaaatgttggtcattatattgttgcacagac
tggtacatatgttggcacaacagagttggaaatctaatatcagttccggtttcgtccaga
gtaggagtgtacgtagatcacagagctggtgttctgtctttctaccgcgtctctggaacc
atgactctcctccacagagtccagacctgcttcactgagccgctgcatgctggagttggg
ttttacgatattggagactctgctaagtttattggactgtaa
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