Xiphophorus maculatus (southern platyfish): 111609501
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Entry
111609501 CDS
T02923
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
111609501
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111609501
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
AAA_23
Motif
Other DBs
NCBI-GeneID:
111609501
NCBI-ProteinID:
XP_023194021
LinkDB
All DBs
Position
8:6339895..6342072
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AA seq
556 aa
AA seq
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MEQSQLNRETFSCSICLDLLTDPVATPCGHSYCMNCIKGHWDEEDQKRIHSCPQCRETFI
PRPVLKKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVACDSCTGRKLKAIKSCLVCLAS
FCEKHLQPHFDSAALKKHKLVEPSKNLQENICSKHDKLLEVFCRTDQKCICYLCIMDEHK
GHETVSAAAERTERQRELEERRGNIQQRIQDQEKDVKLLQQEVEAINRSADKTVEDSEKI
FTQLICLLQKRSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTEDH
NQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELRDKLQDVLRDSWTNISLMVT
EVDVLLSEPETEPKSRAGFLRYSCEITLDPNTANTQLVLSEGNRKVTRMDQDQSYSSHPD
RFTEYFQVLSRESLTGPCYWEVEWRGDVSVAVAYKSISRAGSGDECGFGYNDKSWALDCS
QNNSQFWHNNILTSISGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTRFTEPLLAG
VLVYVTGSSAEFCKPR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagtcagctaaaccgagagactttctcctgttcaatctgtctggatctactg
acggatccagtggctactccctgtggacacagctactgtatgaactgtattaaaggtcac
tgggatgaagaggatcagaaaagaatccacagctgccctcaatgcagagagaccttcata
ccaaggcctgttttgaagaaaaacaccatgctagcagctttagtggagcagctgaagaag
actggactccaagctgctcctgctgaccactgttatgctggacctgaagatgtggcctgt
gattcctgcactggaagaaaactgaaagccatcaagtcctgtttagtctgtctggcctct
ttctgtgagaaacaccttcagcctcattttgattcagctgcattaaagaaacacaagctg
gtggagccgtccaagaacctccaggagaacatctgctctaagcatgataagttgttggag
gtcttctgccgcactgatcagaagtgtatctgctatctctgcattatggatgaacataaa
ggccatgaaactgtgtcagctgcagcagaaaggactgagaggcagagagagctggaggag
agacgaggaaacatccagcagagaatccaagaccaggagaaagatgtgaagctgcttcaa
caggaggtggaggccatcaatcgctctgctgataaaacagtggaggacagtgagaagatc
ttcacccagctgatctgtctcctccagaaaagaagctctgaggtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagaggatcac
aaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacactcatcc
agcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctc
agagacaaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcact
gaggtggatgttctactgtcagaaccagaaacagaaccgaagagcagagctggattctta
agatattcatgtgaaatcactctggatccaaacacagcaaacacacagctggttctatca
gaggggaacaggaaggtgacaaggatggatcaggatcagtcttattctagtcacccagac
agatttactgaatattttcaggttctgagtagagagagtctgactggaccttgttactgg
gaggtggagtggagaggggacgtttctgtagcagtcgcatacaagagtatcagcagagca
ggatcgggtgatgaatgtggttttggatataatgataaatcttgggcattagattgttct
caaaacaatagtcaattttggcacaacaacattttaacttccatctcaggtccagtttcc
tccagagtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctct
gaaaccatgactctcctccacagagtccagaccagattcactgaaccgctactggctgga
gttttggtttatgtaactggatcgtcagcagagttctgtaaacccagatag
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