Xiphophorus maculatus (southern platyfish): 111609504
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Entry
111609504 CDS
T02923
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xma04121
]
111609504
Ubiquitin system [BR:
xma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111609504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_6
zf-RING_10
zf-ANAPC11
U-box
zf-C2H2
Exonuc_VII_L
zf-RING_4
MRP-S31
Motif
Other DBs
NCBI-GeneID:
111609504
NCBI-ProteinID:
XP_023194026
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Position
8:6348016..6350152
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AA seq
554 aa
AA seq
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MEQQAVQLDRETFSCSICLDLLKDPVTTSCGHSYCMNCITKFWDEGEKKENYHCPQCRKT
FTQKPDLQKNTMLAALVEQLKKTGLQAAPTDHCYAGPEDVACDSCTGRKLKAIKSCLVCL
ASFCEKHLQPHYDSAAFKKHKLVEPSKNLQENICSKHDKLLEVFCRTDQKCICYLCTMDE
HKGHETVSAAAERAERQRELEERRGNIQQRIQDQEKDVKLLQQEVEAINRSADKTVEDSE
KIFTQLIRLLQKRSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHNQFLLNYPSLPALSESTHSSSINIRPLRHFEDVTAAVSELRDKLQDVLRDSWTNISLM
VTEVDVLLSEPKSRAGFLRYSCEITLDPNTANTLLGLSEGNRKVTRMNRDQFYSSHPDRF
TYYPQVLSRESLTGPCYWEVECSGLVSVAVAYKSISRAGSGDECAFGYNNKSWALDSYQN
KCTFCHNNIPTSISGPVSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTRFTEPLLAGVW
IYNTGSSAEFCKPR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaggcggttcagctggatcgagaaactttctcctgttccatctgtctggat
ctactgaaggatccagtgacgacttcctgtggacacagctactgtatgaactgcattaca
aagttctgggatgaaggtgagaaaaaggaaaactaccactgtcctcagtgcaggaaaacc
ttcacacagaagcctgacctgcagaaaaacaccatgctagcagctttagtggagcagctg
aagaagactggactccaagctgctcctactgaccactgttatgctggacctgaagatgtg
gcctgtgattcctgcactgggagaaaactgaaagccatcaagtcctgtttagtctgtctg
gcctctttctgtgagaaacaccttcagcctcattatgattcagctgcattcaagaaacac
aagctggtggagccgtccaagaacctccaggagaacatctgctctaagcatgataagttg
ttggaggtcttctgccgcactgatcagaagtgtatctgctatctctgcactatggatgaa
cataaaggccatgaaacagtgtcagctgcagcagaaagggctgagaggcagagagagctg
gaggagagacgaggaaacatccagcagagaatccaggaccaggagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatcgctctgctgataaaacagtggaggacagtgag
aagatcttcacccagctgatccgtctcctccagaaaagaagctctgaggtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagagactcatggacaaacatctcactgatg
gtcactgaggtggatgttctactgtcagaaccaaagagcagagctggattcttaagatat
tcatgtgaaatcactctggatccaaacactgcaaacacactgctgggactatcagagggg
aacaggaaggtgacaaggatgaatagagatcagttttattctagtcacccagacagattc
acttattatcctcaggttctgagtagagagagtctgactggaccttgttactgggaggtg
gagtgtagtgggttagtttctgtagcagtcgcatacaagagtatcagcagagcaggatcg
ggtgatgaatgtgcttttggatataataataaatcttgggcattagattcttatcaaaac
aaatgtacattttgtcacaacaacattccaacctccatctcaggtccagtttcctccaga
gtcggagtgtacctggatcacagagcaggtattctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccagattcactgaaccgctactagctggagtttgg
atttataatactggatcctcagcagagttctgtaaacccagatag
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