Xanthomonas oryzae pv. oryzae KACC 10331: XOO0794
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Entry
XOO0794 CDS
T00235
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00521
Streptomycin biosynthesis
xoo00523
Polyketide sugar unit biosynthesis
xoo00541
O-Antigen nucleotide sugar biosynthesis
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01250
Biosynthesis of nucleotide sugars
Module
xoo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
XOO0794 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XOO0794 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XOO0794 (rmlC)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XOO0794 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AAW74048
UniProt:
Q5H4S2
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All DBs
Position
809683..810240
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AA seq
185 aa
AA seq
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MRIVETRLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISNPLLSAKDAAAPFLADVPAERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatcgtcgaaacgcgtttaccaggttgtgtcgtcatcgagccggcagtgttcggc
gatgagcgcggatatttcttcgaaacgtggaatgccgagcgcttcgggcaacatggtctg
ccgacgcagttcgtgcagagcaatgtctccacctcggccaaaggcgtgttgcgtggtttg
cattaccagtggccgcgtcctcagggcaagctggtcagcgtgctggagggtgaggtctac
gatgtggcggtcgacgtgcgccacggctcgcccaacttcgggcagtgggcggcagtggtg
ttgagcgcagaaaacaagaagcagttctggataccggaagggtttgcgcacggctttgcg
gtgctgtcggagcgagccgtgttcagttacctgtgcaccgacgtgtatgtgaaggaggcc
gatgccggcgtgcgctgggatgatgcggcgatcggtatcgattggccgatcagcaatcca
ttgctctctgcaaaggacgccgctgcgccgtttctggccgatgtgcccgctgagcgcttg
ccggtgtatacaccgtga
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