Xanthomonas oryzae pv. oryzae KACC 10331: XOO3923
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Entry
XOO3923 CDS
T00235
Symbol
lacZ
Name
(GenBank) truncated beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00052
Galactose metabolism
xoo00511
Other glycan degradation
xoo00600
Sphingolipid metabolism
xoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
XOO3923 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
XOO3923 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XOO3923 (lacZ)
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
XOO3923 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2
BetaGal_ABD2
BetaGal_gal-bd
Invasin_D3
BetaGal_ABD_1
Motif
Other DBs
NCBI-ProteinID:
AAW77177
UniProt:
U3GJI5
LinkDB
All DBs
Position
complement(4186730..4189627)
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AA seq
965 aa
AA seq
DB search
MRRREFLAGSVCASSLLGVPALVSGAAATTTTTRVGDGAKPRPTSQTAATDAGGQWLDLD
EGWRFHAGDVPFPRLLGQDETYANGKAGQAWGAAAPDFDDTGWRQLQLPHDFVVEQPVRA
DANVAQGYRPRGVAWYRRTFRLEEAVRGQAVELRLDGIASHATVWVNGMLLARSWSGYNG
LVIDITPVARYGNALNSIAIRVDAEAMDGWWYEGGGIYRHTWLVLRAPLHIAGDGLSAMP
REGPGDVWQVPVQLDLVNSGEQPADAWVEVVLRDAHGAVVAQGQTQLRLAAFDTAQAAIS
IAVPQPQRWSVDTPVLYRLQAEVRSADGRSDGAACEVGFRSLRFDADHGFFLNGRPLKIK
GVCLHQDHAGVGVALPDALHVFRLQRLKSMGCNAIRLHHAVAPELLQACDRLGMLVMAEN
RLFNPAPDYVALLRNMVRRQRNHPSVFLWSLLNEEPLQGTATGYAIMARAASAVRALDDT
RPITAAMNDGMFATRGAADVVDVLGFNYRQYNYDRVHAARPRTPMLSSEDTSAFQTRGAW
FTDLDAHVVAEDDSLAADWGNTHRRAWQLIAERPFVAGSFVWTGFDYRGEPTPFEWPSVG
SFFGIMDQCGFAKGAYWLRRVLWIEDAPVLHVLPHWNWPGREGQSIKVMAFCNAEQVELW
LNGRSLGKQAVDRTQSNQWHVDYVPGVLEAVAWRDGHELARTRVETTGAPVALKLTPDRS
ELRGDGRDAQPVTLEAVDAQGRHVPDCNALLTLQISGGRLLGVGNGDPNSHAADQRTQVA
LFNGLAQAIVQAGCSAGVLRLQARSPGLRDAVLEIGCTSAPLPASVPIVAPVMVVESWCH
TAAFAQPPAPDLARRANDNNSWSNTLPGTLESAPERAGHVLYRTQFTPWQGVQTHGGMLD
LGRLSGPAQVFLDGRAVVTAAAGTPIAVALAPAAGERTLAVILQVAADQPFGFHDVVTVH
YRNSP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggcgtgagttccttgccggcagcgtctgtgcctcgtcgctgcttggcgtgccc
gcgctggtgtctggcgcggcagccaccaccacgaccacgcgtgttggcgatggcgccaag
ccgcgccccacgtcgcagacagcggcgacagatgccggcggccaatggctggatctggac
gaggggtggcgcttccacgccggcgatgtgccgtttccgcgcctgctggggcaggatgag
acgtatgccaatggcaaggcgggccaggcctggggcgcggcggcgccggacttcgacgat
accggttggcggcaactgcaattgccgcacgattttgtggtggagcaaccggtgcgtgca
gacgccaacgtcgcgcagggctatcgcccgcgcggtgtcgcctggtaccggcgcacgttc
cggctggaagaggcagtgcgcggccaggcggtggaactgcgtctggacggtatcgccagc
catgccacggtgtgggtcaacggcatgctgttggcgcgcagttggagcggctacaacggg
ctggtgatcgacatcacgcccgtcgcacgctacggcaatgcactgaacagcatcgccatc
cgcgtcgatgccgaggccatggatgggtggtggtacgaaggcggcggcatctaccgacac
acctggctggtgctgcgcgcgcccctgcatatcgccggcgacggcctgtcagcgatgccg
cgcgaaggcccgggcgatgtctggcaggtgccggtgcagctggaccttgtcaacagtggc
gaacaacccgctgacgcgtgggtcgaggtcgtcttgcgcgatgcgcatggcgctgtcgtg
gcgcaaggtcagacacaactgcggctcgctgccttcgacaccgcacaggcggcgatcagc
atcgcagtgccgcagccgcagcgctggagtgtggacacccccgtgctgtatcgcctgcaa
gccgaggtgcgcagcgcagatggccgcagcgacggtgccgcgtgcgaggttggttttcgt
agcctgcgcttcgacgccgaccacggattttttctcaatgggcgtccgctcaagatcaag
ggcgtctgcctgcatcaggaccatgccggcgtcggcgtggcgctacccgatgcactgcat
gtctttcgtctgcagcggctgaaatcgatgggctgcaatgccatccgcctgcaccacgca
gtggcgccggaactgttgcaggcctgcgaccgtctcggcatgctggtgatggccgaaaac
cgcctgttcaatcctgcgcccgactatgtggcgctgctgcgcaacatggtgcggcgccag
cgcaatcatcccagcgtgtttctgtggtcgctgctcaatgaagagccgctgcagggcacc
gctaccggttacgcgatcatggcgcgcgccgccagcgcagtgcgcgcgctcgacgacacc
cgtccgatcaccgccgcaatgaacgacggcatgttcgccacccgcggcgcggccgatgtg
gtggacgtgctcggtttcaactatcgccagtacaactacgaccgcgtgcatgcggcgcgt
ccgcgcacgccgatgctgtccagcgaagacaccagtgcgtttcagacgcgtggtgcgtgg
ttcaccgatctggacgcgcacgttgtggccgaagacgacagcctggcggcggattggggc
aatacccatcgccgcgcctggcagctgattgccgaacgcccgttcgtcgctggcagtttc
gtatggaccggtttcgattatcgcggcgaacccacaccgttcgaatggccatcggtaggg
tcgttcttcggcatcatggaccaatgcggatttgccaagggcgcctattggttgcgccgc
gtcttatggatcgaggatgcgccggtactgcacgtgttgccgcactggaactggcccggc
cgcgaaggccagtcgatcaaggtgatggcgttctgcaatgccgagcaggtggagctatgg
ctcaacggccgctcgctcgggaaacaggcggtggatcgtacgcaatccaatcaatggcac
gtggattacgtgccgggtgtgcttgaagcggtggcctggcgcgatggacacgaactggcg
cgcacgcgcgtggaaaccaccggcgcgccagtcgcgctcaaactcacccccgaccgcagc
gaactgcgcggcgatggccgcgacgcgcaaccggtgacgttggaggcggtggacgcgcag
gggcgtcacgtgcccgattgcaatgcactgctgaccctgcagatcagtggcggccggttg
ctgggtgtcggcaatggcgacccgaattcgcatgcagcggatcaacgcacgcaggtggcc
ttgttcaatggactggcccaggcaatcgtgcaggccgggtgcagcgcaggcgtgttgcga
ctgcaggcgcgtagcccgggattgcgcgatgcagtgcttgagatcggctgcacgtcggcg
ccgctgccggcgtcggtgccgatcgtggcgccagtgatggtggttgaaagctggtgccac
accgccgcattcgcgcagccgccggcgccggatctcgcgcgccgtgccaacgacaacaac
agctggagcaatacgctgcccggtacgttggaaagcgctcccgaacgtgcaggccatgtg
ttgtatcgcacgcaattcacgccctggcagggcgtgcaaacccacggcggcatgctcgac
ctgggccgcctcagcgggccggcgcaggtatttctggatggccgcgcggtcgtcacggca
gcggccggtacaccgatcgcggtggcgcttgcacccgcagctggcgagcgcacgctcgcg
gtgattctgcaggtcgctgccgatcaaccgtttggattccacgacgtcgtcaccgtgcat
tatcggaactcgccatga
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