Xanthomonas oryzae pv. oryzae KACC 10331: XOO4088
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Entry
XOO4088 CDS
T00235
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00860
Porphyrin metabolism
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01240
Biosynthesis of cofactors
Module
xoo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
xoo_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
XOO4088 (hemD)
Enzymes [BR:
xoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
XOO4088 (hemD)
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Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AAW77342
UniProt:
Q5GVD1
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Position
complement(4372968..4373771)
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AA seq
267 aa
AA seq
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MAALSHNHTMTGLAHPDAAWILISLRPSGEHAPLRRAVARHGGRVLALSPWRLQTNDAAQ
ARDALRQALAAPIAVFTSPAAVQAAHRLAPLQRPAQAHWVSVGDGTARALQACGIDTVVR
PTRMDSEGLLALPLLQAPLQAVGLITAPGGRGMLAPTLEQRGARIVRADVYQRIPLRLRA
SAIQALSHALPRSVLALSSAEALTLVLQQLPSALIEKWQQRPVVASSDRMLDAAHAAGFI
HRMRAEGPLPKQLAAAAAAIVTPPRPC
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgctctcgcataatcacaccatgaccggccttgcccatcccgatgctgcctgg
atcctgatctcgctgcgccccagcggcgaacatgcgccgctacggcgggcggttgcgcgg
catggcgggcgggtactggcgctgtcgccgtggcgcttgcagaccaacgatgccgcacag
gcgcgggacgcgctgcgacaggcgctggcagcaccgattgcggtgttcaccagcccggcg
gccgtgcaggcggcgcatcgtctggcgccgctgcagcgcccggcgcaggcgcactgggtg
agcgtgggcgatggcactgcgcgcgcattgcaggcctgcggcatcgacactgtggtgcgc
ccgacgcgcatggatagcgaaggcctgcttgcgctgccgctgctgcaggcgccgctgcag
gccgttgggctgatcaccgcgcccggcggacgcggcatgctggcaccaacgctggaacag
cgcggtgcgcgcattgtgcgagccgatgtctatcaacgcatcccgctgcgcttgcgcgcg
tcggccatccaggccttatcgcacgcattgccgcgcagcgtgctggccttgagcagcgcc
gaggcactgacgctggtcctacaacagctgccttccgcgctgatcgagaaatggcaacag
cggccggtggtcgcgtccagcgatcgcatgctggatgccgcgcacgctgctggcttcatc
catcgcatgcgtgcagaaggcccactgccaaagcagcttgccgctgctgcggcagcgatc
gtgacaccaccgcgaccttgctga
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