Xanthomonas oryzae pv. oryzae KACC 10331: XOO4377
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Entry
XOO4377 CDS
T00235
Symbol
accC
Name
(GenBank) biotin carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00280
Valine, leucine and isoleucine degradation
xoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XOO4377 (accC)
Enzymes [BR:
xoo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
XOO4377 (accC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
MCC_alpha_BT
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
HlyD_D23
PCC_BT
GARS_A
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AAW77631
UniProt:
Q5GUJ2
LinkDB
All DBs
Position
complement(4650480..4652507)
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AA seq
675 aa
AA seq
DB search
MTQRDPIAAATQAPFDKILIANRGEIACRVIATCRTLGIATVAVYSDADRNARHVRLADE
AVHIGASPAQQSYLRGEAILEAARATGAQAIHPGYGFLSENATFAEACAHAGIVFIGPPA
AAIRAMGDKSAAKALMQRAGVPLTPGYHGDEQAPAFLRAQADAIGYPVLIKASAGGGGKG
MRRVDASAAFEDALASCQREAQSAFGNAHVLVEKYVERPRHIEIQVFGDTHGQVVHLFER
DCSVQRRHQKVLEEAPAPGMSEARRAAMGKAAVDAAQAVGYVGAGTVEFIAGPDGDFYFM
EMNTRLQVEHPVTELITGTDLVEWQLQVAAGARLPRRQHELRIHGHALEARLYAEDAERG
FLPSTGTLRQLQLPVASAHVRIDAGVEQGDTISPYYDPMIAKLIVWETDRPAALARMRAA
LAQFHAVGVTTNRAFLSRLIATAAFASASLDTALIEREHAVLFPQARSPDTAWWCLAAVL
IADTLPAAVADPADPHSPWQQNDGWRIGARAVQRVILEANGERRQLDVRPDADGWQVTNA
GQTHTLRYHPHDTGLRVEMDGRQWRVQVLRDGSLLTLIDAAQRATFHYHDALVEADQPAQ
DAGGLTAPMPGRIVSLAATVGQPVTRGQALVVLEAMKMEHTLHAPSDGTVQAYLVAEGDL
VADGAALVEFVSASA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgcgaccctatcgccgcagcaacgcaagcgcccttcgacaagatcctgatc
gccaatcgcggggagatcgcctgccgggtgatcgcgacctgccgcaccctcggcattgcg
acggtggcggtgtattcggatgcagaccgcaatgcacggcatgtgcgtctggcagacgaa
gccgtccacatcggtgcctccccggcgcagcaaagctatctgcgtggcgaagcgattctc
gaagcggcgcgcgcaaccggtgcgcaggcgatccacccgggttatggctttctctcggaa
aacgccacatttgccgaggcctgtgcgcacgctggcatcgtcttcatcggcccaccggca
gcggcgattcgcgcgatgggcgacaagagcgctgccaaggcgctgatgcaacgtgccggt
gtgccgctgacgcctggctaccacggcgatgagcaggcgccggcattcttgcgtgcgcaa
gccgacgcaatcggctacccggtactgatcaaagccagtgccggtggcggcggcaagggc
atgcgccgggtggatgccagcgcggccttcgaagatgcgttggctagctgtcagcgcgaa
gcgcagtcggcgtttggcaatgcgcatgtgctggtggagaaatatgtcgagcggccgcgg
catatcgaaatccaggtgttcggcgatacgcatggccaggtggtgcacctgtttgagcgc
gactgctcggtgcagcgtcgccaccagaaagtgctggaagaagcgcctgcgcccggcatg
agcgaggcgcggcgcgcggcgatgggcaaggcggcggtggatgcggcgcaagcggtgggt
tacgtcggtgcgggcacggtggaattcatcgctggcccggacggcgatttctatttcatg
gaaatgaacacccggctgcaggtggagcatccggtgaccgagttgatcaccggcaccgat
ctggtcgaatggcaattgcaggttgccgctggcgcacgcttgccgcgtcggcagcacgag
ttgcgcattcacgggcatgcgctggaggcgcgcctgtacgccgaagatgccgagcgcggt
tttctgccgtccaccggaacgctgcgccagctgcagttgcctgtcgccagcgcgcatgtc
cgcatcgatgcgggcgtggagcaaggcgacaccatcagcccttactacgacccgatgatt
gccaagctaatcgtctgggagaccgatcgccccgcagcgctggcgcgcatgcgcgcggca
ttagcgcagttccatgcggtgggcgtcaccaccaaccgtgcattcctgtcgcgcctgatt
gcgaccgcggcgttcgcatcggcgagcctggacaccgcgctgatcgagcgcgaacacgcc
gtgctgtttccacaggcgcgcagcccggacaccgcatggtggtgcctggcggcggtgttg
atcgcagatacgttgccggccgcggtggctgatccggccgatccgcactcgccgtggcag
caaaacgatggttggcgtatcggtgcacgtgcagtccagcgcgtgattctggaagcaaat
ggcgagcgccgccaactcgatgtacgacccgatgccgatggctggcaagtcaccaacgca
ggccagacgcataccttgcgctaccacccgcacgatacgggcttgcgtgtggagatggac
ggccggcaatggcgtgtacaggtgttgcgtgacggcagcctgctgaccctgatcgacgcc
gcgcagcgggcaaccttccattaccacgatgcgctggtggaagctgatcaaccggcgcag
gacgctggcgggctgaccgcaccaatgcccggccgcatcgtctccctggccgcaacggtg
ggccagccggtcacccgcgggcaggcgctggtggtgctggaagcgatgaagatggagcac
accctgcacgcgcccagcgatggcacggtccaggcgtatctggtggccgaaggcgatctg
gtggccgacggtgcagcgctggtggaattcgtgtccgcatctgcgtag
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