Xanthomonas oryzae pv. oryzae PXO99A: PXO_03171
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Entry
PXO_03171 CDS
T00763
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop00521
Streptomycin biosynthesis
xop00523
Polyketide sugar unit biosynthesis
xop00541
O-Antigen nucleotide sugar biosynthesis
xop01100
Metabolic pathways
xop01110
Biosynthesis of secondary metabolites
xop01250
Biosynthesis of nucleotide sugars
Module
xop_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PXO_03171 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PXO_03171 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PXO_03171 (rfbC)
Enzymes [BR:
xop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PXO_03171 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACD61043
UniProt:
A0A0K0GQ04
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Position
complement(4624102..4624659)
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AA seq
185 aa
AA seq
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MKIVETRLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFLQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISNPLLSAKDAAAPFLADVPAERL
PVYKP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgtcgaaacgcgtttaccaggttgtgtcgtcatcgagccggcagtgttcggc
gatgagcgcggatatttcttcgaaacgtggaatgccgagcgcttcgggcaacatggtctg
ccgacgcagttcttgcagagcaatgtctccacctcggccaaaggcgtgttgcgtggtttg
cattaccagtggccgcgtcctcagggcaagctggtcagcgtgctggagggtgaggtctac
gatgtggcggtcgacgtgcgccacggctcgcccaacttcgggcagtgggcggcagtagtg
ttgagcgcagaaaacaagaagcagttctggataccggaagggtttgcgcacggctttgca
gtgctgtcggagcgagccgtgttcagttacctgtgcaccgacgtgtatgtgaaggaggcc
gatgccggcgtgcgctgggatgatgcggcgatcggtatcgattggccgatcagcaatcca
ttgctctctgcaaaggacgccgctgcgccgtttctggccgatgtgcccgctgagcgcttg
ccggtgtataaaccgtga
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