Xanthomonas oryzae pv. oryzicola BLS256: XOC_2080
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Entry
XOC_2080 CDS
T01873
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
XOC_2080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_2080
Enzymes [BR:
xor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
XOC_2080
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
XOC_2080
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AEQ96226
UniProt:
G7TCP8
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All DBs
Position
2080005..2080175
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AA seq
56 aa
AA seq
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MSLSEYRRKRSFAKTREPEPGKALPPGQRAIFVVQLHHASRRHSDFCLQVGDALKR
NT seq
171 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcagcgagtaccgccgcaagcgcagcttcgccaagacccgcgagccggagccg
ggcaaggccttgccaccagggcagcgcgcgatcttcgtggtgcagctgcatcacgccagc
cgtcgccactccgatttctgcctgcaggtgggcgatgcgctcaagcgctga
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