Xanthomonas perforans: BJD13_04020
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Entry
BJD13_04020 CDS
T04778
Name
(GenBank) multidrug efflux RND transporter permease
KO
K18138
multidrug efflux pump
Organism
xpe
Xanthomonas perforans
Pathway
xpe01501
beta-Lactam resistance
xpe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BJD13_04020
01503 Cationic antimicrobial peptide (CAMP) resistance
BJD13_04020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xpe02000
]
BJD13_04020
01504 Antimicrobial resistance genes [BR:
xpe01504
]
BJD13_04020
Transporters [BR:
xpe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BJD13_04020
Antimicrobial resistance genes [BR:
xpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BJD13_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
APO98336
UniProt:
A0A0G9C980
LinkDB
All DBs
Position
complement(547188..550358)
Genome browser
AA seq
1056 aa
AA seq
DB search
MPKFFIEHPVFAWVVAILISLAGVISILNLGIESYPTIAPPQVTVTANFPGASADTAEKA
VTQVIEQQLTGIDHLLYFNSSSAANGRVTITLTFETGTDADIAQVQVQNKVSLATPRLPS
EVTQQGVVVAKANAGFLMVAALRSDNPSIDRDALNDIVGSRVLEQISRVPGVGSTNQFGA
EYAMNIWLNPEKLQGYNLSATQVLTAVRNQNVQFAAGSVGADPTPEGISFTATVSAEGRF
SSPEQFENIILRTDNNGATVRLKDVARVTVGPSNYGFDTQYNGKPTGAFGIQLLPGANAL
NVSEAVGAKLDELQPTFPQGVTWFAPYESTTFVRISIEEVIHTLVEAIVLVFLVMLLFLQ
NFRATVIPTLVIPVALLGTFFGMYMIGFTINQLTLFAMVLAIGIVVDDAIVVIENVERIM
SEEHLEPKAATQKAMTQITGAVVAITVVLAAVFIPSSLQPGASGAIYKQFALTIAMSMGF
SAFLALSFTPALCGAFLKSTHSTKKNWVYRTFDKYYDKLAHRYVGVVGHTLKRSPPWMIA
FVALVVLCGFLFTRMPGSFLPEEDQGFAVAIVQLPPGATKIRTNEAFAQMRAVLEKQPAV
EGMLQIAGFSFLGSGENVGMGFIRLKPWEERDVTAEQLIQQLNGAFYGIKGAQIFVVNLP
TVQGLGQFGGFDMWLQDRSGAGQEALINARNIVLGKAAEKQDTLVGVRPNGLENSPQLQL
HVDRVQAQSMGLDVSDIYSSIQLMLAPVYVNDYFAEGRIKRVNMRADDQFRAGPESLRNF
FTPSATATGADGQPAMIPLSNVVKAEWNYASPALNRYNGYSAVNIVGNPAPGGSSGQAMS
AMEDIVNNDLPPGFGFDWSGMSYQEIIAGNAATLLLALSVVVVFLCLAALYESWSIPVAV
LLVVPIGVLGAITFSMLRGLPNDLYFKIGMITVIGLAAKNAILIVEFAVEQRAAGKTLRE
ATLEAAHLRFRPILMTSFAFILGVLPLAISTGAGANSRHSIGTGVIGGMVFATVLGVIFI
PLFFVVVRRMLGDKLDEQSKEYLAVQNDGGTHRPDR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagttttttatcgaacacccggtctttgcgtgggtggtggcgatcctgatctcg
cttgcgggcgtgatctcgatcctgaatctgggtatcgagtcgtacccgacgatcgccccg
ccgcaggtcaccgtcaccgccaacttccccggcgccagcgccgacaccgccgaaaaggcg
gtgacccaggtcatcgaacagcagctcaccggcatcgaccacctgctgtacttcaactcg
tcctcggccgccaacggccgcgtgaccatcaccctgaccttcgaaaccggcaccgacgcg
gatatcgcgcaggtgcaggtgcagaacaaggtgtcgctggccacgccgcgcctgccctcg
gaagtgacccagcagggcgtggtggtggccaaggccaacgccggcttcctgatggtggcc
gcactgcgctcggacaacccctcgatcgaccgcgacgcgctcaacgacatcgtcggttcg
cgcgtgctcgagcagatctcgcgcgtgcccggcgtgggcagcaccaaccagttcggcgcc
gagtacgcgatgaacatctggttgaacccggagaaactgcagggctacaacctgtcggcg
acccaggtgctgaccgcggtgcgtaaccagaacgtgcagttcgctgccggttcggtgggc
gccgacccgaccccggaaggcatcagcttcaccgccacggtgtcggcggaaggccgcttc
agctcgcccgagcagttcgagaacatcatcctgcgtaccgacaacaatggcgccaccgtg
cgtttgaaagacgtcgcacgcgtcaccgtcgggccaagcaattacggcttcgacacccag
tacaacggcaagcccaccggtgccttcggtatccagctgttgccgggcgccaatgcattg
aacgtgtccgaggcggtcggcgccaagctcgacgaactgcagcccaccttcccgcagggc
gtgacctggtttgcgccgtacgaatcgaccaccttcgtgcgcatttccatcgaggaagtg
atccacacgctggtggaagccattgtgctggtgttcctggtgatgctgctgttcctgcag
aacttccgcgccaccgtgattcccacgctggtgattccggtcgcgctgctgggcacgttc
ttcggcatgtacatgatcggcttcaccatcaaccagctgacgctgtttgcgatggtgctg
gcgatcggcatcgtggtggacgatgcgatcgtggtgatcgagaacgtcgaacgcatcatg
agcgaggagcacctggagcccaaggcggccacccagaaggcgatgacccagatcaccggc
gcggtggtggccatcaccgtggtgctggcagcggtgttcatcccctcctcgctgcagccc
ggcgcctcgggtgcgatctacaagcagttcgcgttgaccatcgccatgtcgatggggttc
tctgcgttcctggcgttgagcttcacgccggcgctgtgcggcgcgttcctcaagtcgacc
cactcgaccaagaagaactgggtctaccgcaccttcgacaagtactacgacaagctggcg
catcgctatgtcggcgtggtgggccataccctcaagcgctcgccgccatggatgatcgcg
ttcgtggcgctggtggtgctgtgcggcttcctgttcacgcgcatgccgggcagcttcctg
ccggaagaagaccagggctttgccgtggccatcgtgcagctgccgccgggcgcgaccaag
atccgcaccaacgaggcgttcgcgcaaatgcgtgcggtgctggagaagcagccggccgtg
gaaggcatgctgcagatcgccggcttcagcttcctgggctcgggcgaaaacgtcggtatg
ggcttcatccggctcaagccatgggaagaacgcgacgtcactgccgagcagttgatccag
caactcaatggcgccttctacggcatcaagggcgcgcagatcttcgtggtcaacctgccc
accgtgcagggcctggggcagttcggcggcttcgacatgtggctgcaggaccgttccggt
gccggccaggaagcgctgatcaatgcgcgcaacatcgtgctcggcaaggcggcggagaag
caggacaccctggtcggcgtgcgtccgaacggcctggaaaactcgccgcagctgcagttg
cacgtggaccgcgtgcaggcgcaatcgatgggcctggatgtcagcgatatctatagctcg
atccagctgatgctggcgccggtgtacgtcaacgactacttcgccgagggccgcatcaag
cgcgtcaacatgcgtgccgacgatcagttccgcgccggccccgagtcgctgcgcaacttc
tttacccccagcgccacggccaccggtgccgacggtcagccggccatgatcccgctgagc
aacgtggtcaaggccgagtggaactacgcctcgccggccctgaaccgctacaacggctat
tcggccgtgaacatcgtcggcaacccggctccgggcggcagttccggccaggcgatgagc
gcgatggaagatatcgtcaacaacgatctgccgccgggcttcggtttcgactggagcggc
atgtcctaccaggaaatcatcgccggtaatgcggccacgctgctgctggcgctgtcggtg
gtggtggtgttcctgtgcctggccgcgctttacgagagctggtcgattccggtggcggtg
ctgctggtggtgccgatcggcgtgctgggcgcgatcaccttctcgatgttgcgcgggttg
ccgaacgatctgtacttcaagatcggcatgatcacggtgattggtctggcggccaagaac
gcgatcctgatcgtggaatttgcagtggagcagcgtgcggcgggcaagaccctgcgcgag
gccacgctggaagcggcgcacctgcgcttccgcccgatcctgatgacctcgttcgcgttc
atcctgggtgtgttgccgctggccatctccaccggtgccggcgccaactcgcgtcactcc
atcggtaccggcgtgatcggcggcatggtgttcgccaccgtgctcggcgtgatcttcatc
ccgctgttcttcgtggtggtgcgccgcatgctgggcgacaagctggacgagcagtccaag
gaatatctggccgtgcagaacgatggcggaacccaccgcccggatcgctga
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