Xanthomonas prunicola: MUG10_17770
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Entry
MUG10_17770 CDS
T08368
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xpr
Xanthomonas prunicola
Pathway
xpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG10_17770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpr03019
]
MUG10_17770
03009 Ribosome biogenesis [BR:
xpr03009
]
MUG10_17770
Enzymes [BR:
xpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUG10_17770
Messenger RNA biogenesis [BR:
xpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUG10_17770
Ribosome biogenesis [BR:
xpr03009
]
Prokaryotic type
rRNA helicases
MUG10_17770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
adh_short
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
USI99840
LinkDB
All DBs
Position
4026059..4027981
Genome browser
AA seq
640 aa
AA seq
DB search
MTQESSAPLLFADLGLSDAVMKAVAAVGYESPSPIQAATIPALLSGRDVLGQAQTGTGKT
AAFALPVLSNADLNQLKPQALVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQ
QLSALKRGVHVVVGTPGRVIDHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKL
PEKRQVALFSATMPPAIRRIAQTYLKDPAEVTIAAKTTTSANIRQRYWWVSGLHKLDALT
RILEVEPFDGMIIFARTKAATEELAQKLQARGMAAAAINGDMQQAAREKTIAQLKDGKLD
ILVATDVAARGLDVERVSHVLNYDIPYDTESYVHRIGRTGRAGRNGDAILFVTPREKGML
RSIERATRQPIEEMQLPSVDAVNDTRVARFMTRITETLAGGQIDMYRDLLQRYESENNVP
AIDIAAAMAKLLQGDAPFLLTPPVRGAREEFAPRERSERADRGDRNDRGDRPRFEPKFER
GPRADGERAARPPRGDDAGGERPRRDPVAPRGEPEFGMESYRIEVGHSHGVKPANIVGAI
ANEAGLESRYIGRIDIQDDYSILDLPADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAAS
PSKPRFPRGGKPSGRPNGPGRPMDRAGAPHRKGPPKPRGE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagaatcttccgcgccgctgctgtttgcagacctcggcctctcggacgctgtg
atgaaagccgttgccgctgtcggctacgagtcgccgtcgccgatccaggctgccaccatc
cccgcgctgctgtccggccgcgacgtcctcggccaggcgcagaccggtaccggcaagact
gccgcgttcgcgctgccggtgctgtccaacgccgacctgaaccagctcaagccgcaggcg
ctggtgctggcaccgacccgcgagctggccatccaggtcgccgaggccttccagaaatat
gccgaagccattcccggcttccgcgtgctgcccgtgtacggcggccagccctacgcccag
cagctgagcgcgctcaagcgcggcgtgcatgtggtggtcggtaccccgggccgggtgatc
gatcacctggatcgcggcaccctggatctttcccagctcaagacgctggtgctggacgaa
gccgacgaaatgctgcgcatgggctttatcgacgatgtcgaagccgtgctcaagaaactg
ccggaaaagcgccaggtggccttgttctcggcgaccatgccgccggccatccgccgcatc
gcgcagacctatctgaaggatccggccgaagtcaccatcgcggccaagaccaccacctcg
gccaatatccgccagcgctactggtgggtgagcggcctgcacaagctggacgcactgacc
cgcattctcgaggtcgagccgttcgacggcatgatcatcttcgcgcgcaccaaggcggcc
accgaagagctggcgcagaagctgcaggcacgcggcatggccgcggccgccatcaacggc
gacatgcagcaggccgcccgcgagaagaccattgcccagctcaaggacggcaagctcgac
atcctggtcgccaccgacgtggccgcgcgcggtctggacgtggagcgcgtcagccatgtg
ctcaattacgacatcccgtacgacaccgaaagctatgtgcaccgcatcggccgtaccggt
cgtgccggccgcaatggcgatgcgatcctgttcgtcaccccgcgcgagaagggcatgctg
cgctcgatcgagcgcgccacccgccagccgatcgaagaaatgcagctgccgagcgtggat
gcggtcaacgacacccgcgtggcgcgtttcatgacccgcatcaccgagaccctggccggt
ggccagatcgacatgtatcgcgatctgctgcagcgctacgagagcgagaacaacgtgccg
gcgatcgatatcgccgccgccatggccaagttgctgcaaggcgatgcgccgttcctgctg
accccgccggtgcgtggcgcgcgcgaggaattcgcaccgcgcgagcgcagcgagcgtgcc
gaccgcggtgatcgcaatgatcggggtgaccgtccgcgtttcgagcccaagttcgagcgt
ggcccgcgtgccgacggcgagcgcgctgcgcgtccgccgcgtggcgacgatgccggtggc
gagcgtccgcgtcgcgatccggttgccccgcgcggcgagccggagttcggcatggagagc
taccgcatcgaagtgggccacagccatggcgtcaagccggccaacatcgtcggtgcgatc
gccaatgaagccgggctggaaagccgctatatcggccgtatcgatatccaggacgattat
tcgatcctggatctgccggccgacatgccgcgcgaactgcttacccacctgaagaaggtc
tgggtatccggtcagcaactgaacatgcgcaagctggaagagggcgaggcagccgcgtcg
ccgtccaagccgcgcttcccgcgtggcggcaagccgtccggtcgtccgaacggcccaggc
cgtccgatggaccgcgcgggcgcaccacaccgtaagggcccgcccaagccgcgcggcgag
taa
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