Xanthomonas sacchari: SB85_13245
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Entry
SB85_13245 CDS
T03566
Name
(GenBank) hemagglutinin
Organism
xsa
Xanthomonas sacchari
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
SprB
Big_9
OMP_b-brl
NtrZ
Motif
Other DBs
NCBI-ProteinID:
AJC47652
LinkDB
All DBs
Position
3174552..3179129
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AA seq
1525 aa
AA seq
DB search
MNQGQSVTFDVSDCDGDSNGGMTDPLVQPAHGSFVLSQQSGPGTQTVTYTNNGDGATSDS
FYLLDQDNNQVVFNITINPSRSASITVSPSSANEDSGTPFVYTVTLSSTNSSATTVNLTR
SGTATSGTDYTGAVSSVVVPANATSASFSVTPVTDTTVEPDETVIFQVANGTGYSIGNPS
SATGTILNDDQPALSVNDVSQNEGNSGNTAFTFTVSLSQPAGSGGVSFDIATANGTATAG
TDYISSSVNGLTIPAGSSSATFTVQVIGDTLNEPDETFFVNVSNVSGATVADGQGQGTIV
NDDAQPSLSIGDVSVIEGNSGNTTATFTVTLSAASGQTVMVNYGTADGTATAGSDYVATS
GPLAFAPGTTVQSIAVTIIGDTTVEPDETFTVTLSAASNATIARATATGTILNDDAVVTI
SPTSLPAATAGTSYSQTLTASGGTAPYGFAITTGTLPVGMLLSSAGVLTGTPSGSGSFNF
TVSATDSGASPISGSRAYTLTVAAPTVTLPATTLPNGTAGQAYSAAITQASGGIAPYTYA
VTAGALPAGVTVNSATGALSGTPTVTGNFSFTLVATDSTSGTPGQASRSYTLAIVAPTLT
VAPSTLPSGTAGTAYSQTLSTSGGTAPYTYALSSGALPAGLSLSSAGVLSGTPTVAGSFT
FVVGVTDAGSFGGSHAYTLSIASPTLAITPPTLPAAAINASYSQALSTSGGTAPYSYVLN
AGALPSGMSLSAGGVLSGTPTTAGNFAFTVGVTDANAFTAAQAFTLTVASPTLTLSPPAL
PAGTAGSAYSQALSATGGTAPYSYSLATGALPAGLSLSAAGVLSGTPTQAGSFVFTATVT
DSTAGVPGQASRSYTLSIAAPTLTPGQPTLPAGTAGTAYNQTLSTSGGTAPYSYSVVSGA
LPTGLSLTPAGVLSGTPSAAGSFAFSIKVSDANGFSATQAYTLTIASAVPAPVAANDTGA
TLVDTALTLAVTGNDTGSIDSIAIATAPSHGTATVDGVRLVYTPAPGYVGVDSVHYTAIG
AGGSSAPAVVTITVNARPIAVSVTVPAVTGQTQTLDVTRDATGGPFVAAAVVAVLPANAG
TATITRAAARAAGVPTAAADDGPGFILTFVPNPAFSGNATVRFTLSNAYATSAAADIVFV
IAPRRDPTQDAQVRGLIDAQAESTRRFAKAQIDNFQRRLEATHRGARGFDNGVSFQASSQ
CRQRDRTLQSDRNLDAQACDPANRDLRDGAMDGGADTASAAPRDATAAGDLGLWVGGAIR
SGSLDKQSQRAGVDFQTDGLSLGADYRVSPVFALGAGVGFGRDDSDVGRDGSHSKSTAYT
LALYASYHPGQTLFFDTLVGYQLLSYDLRRYVTDNGALAEGDRSGHQWIASLSAGADLQR
GDWQITPYARVDAARATLDAYSEAAMAPYALRYEDMDVATTTGNLGLRLEWRRQMTWGRL
TPQFRLEYQHDFQGRGDATLGYADIVGGTLYRTGQSVYDRNRLMLGVGVVFSTDQGLSTR
VEYRGVTDGDSGSDQTWMFNVEKKY
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagggccaatcggtgacgttcgacgtcagcgactgcgacggggactcgaacggt
ggcatgaccgatcctcttgtgcagcctgcgcacggcagtttcgtgctcagccagcagtcc
ggtcctggcacacagacggtgacctataccaacaacggggacggcgcgacctcggactcg
ttctacctgctggaccaggacaacaaccaggtcgtcttcaacatcaccatcaacccctcg
cgcagcgccagcatcacggtctccccgtccagcgccaacgaggacagcggcacgcccttc
gtctacacggtgacgctgagctcgaccaacagttcggcgaccacggtgaacctgacccgc
agcggcacggccaccagcgggaccgactacaccggtgcggtcagcagcgtcgtggtgccg
gccaacgcgacgtccgccagcttcagcgtcaccccggtcaccgataccacggtggagccg
gacgagacggtgatcttccaggtggccaacggtaccggctactcgatcggcaacccctcc
agcgccaccggcaccatcctcaacgacgaccagccggcgctgtcggtcaacgacgtgtcg
cagaacgagggcaattccggcaacaccgcgttcaccttcaccgtctcgctcagccagccg
gccggcagtggcggggtcagcttcgacatcgccaccgccaacggcaccgcgaccgcgggc
accgactacatctcctccagcgtgaacgggctgaccattccggccggcagcagcagtgcc
accttcaccgtgcaggtgatcggcgacacgctcaacgaacccgacgaaaccttcttcgtc
aacgtcagcaacgtcagcggcgccaccgtcgccgacggacagggccagggcaccatcgtc
aacgacgatgcgcagccgtcgctctcgatcggcgatgtcagcgtcatcgaaggcaacagc
ggcaacaccacggcgacgttcacggttaccctcagcgccgccagcggccaaaccgtcatg
gtcaactacgggaccgccgacggcaccgccactgccggcagcgactatgtcgccacctcg
ggtccgctggccttcgcgcccggcaccaccgtgcagagcatcgcagtgacgatcatcggc
gacaccaccgtcgagccggacgagacgttcacggtgaccctgtccgctgccagcaacgcc
accatcgcccgcgccaccgccaccggcacgatcctcaacgacgatgcggtggtgacgatc
tcgccgacgtcgctaccggcggccaccgccggcaccagctacagccagaccttgacggcc
agtggcgggacggcgccatatggcttcgcgatcaccaccggcacattgccggtgggcatg
ctgctgagttccgccggcgtgctgaccggcacgcccagcggcagcggcagcttcaatttc
accgtgtccgcgaccgacagcggcgcgtcgcccatcagtggtagccgtgcctatacgttg
acggtggctgcgccaaccgtgacgctgccggcgacgaccctgcccaacggcaccgccggc
caggcctatagcgcggcgatcacccaggccagcggcggcatcgcgccgtacacctatgcc
gtcacggccggcgccttgccggcaggcgtgaccgtcaacagtgcgaccggtgcgctcagc
ggcacgcccaccgtgaccggcaatttcagcttcaccctggtcgcgaccgacagtacctcc
ggaacgccgggccaggcgtcgcgcagctatacgctggcgatcgtggcgccgaccttgacc
gtcgccccgtccaccctgccgtccgggaccgcgggcaccgcctacagccagacgttgagc
accagcggcgggacggcgccctacacctacgcgctcagctccggtgccttgcctgcgggc
ctgagcctgagcagtgccggtgtcctatccggcaccccgaccgtggccggcagtttcacc
ttcgtcgtcggcgtcaccgatgccggcagtttcggcggctcgcacgcctacaccctgtcc
atcgcctcgccgaccctggccatcaccccgccgacgttgccggcagcggcgatcaacgcc
agctacagccaggcgctgagcaccagcggcggcaccgcaccgtacagctatgtgctcaat
gccggcgccttgccgagcgggatgagcctgagcgcgggcggcgtgctgtccggtacgccg
accacggccggcaacttcgcgttcaccgtgggcgttaccgacgccaacgccttcactgcg
gcgcaggcgttcaccctgacggtggcctctccgacgctgacgctgtcgccgccggcgctg
ccggccggcaccgcgggcagcgcctacagtcaggcgctcagcgccaccggcggtaccgcg
ccctacagttacagcctcgctaccggcgcgttgccggccgggctgagcctgagcgcggcc
ggcgtgctgtccggtaccccgacccaggcgggcagtttcgtcttcaccgccaccgtcacc
gacagcaccgccggcgtccccggccaggccagccgcagctacacgctgagcatcgcggcg
ccgaccctgactccggggcagccgaccttgcctgccggcaccgcgggcaccgcgtacaac
cagaccctgagcaccagcggcggcaccgcaccgtacagctacagcgtggtcagcggcgcg
ctgccgaccgggctgagcctgaccccggcgggcgtgctgtccggcacgccgagcgcggcc
ggcagcttcgccttcagcatcaaggtgagcgacgccaacggcttctcggccacgcaggcc
tacaccctgaccatcgcctcggcggtgccggcaccggtggcggcgaacgacaccggcgcc
accctcgtggataccgcgctgaccctggcggtcaccggcaacgacaccggcagcatcgac
agcatcgccatcgccaccgcgcccagccacggcaccgcgaccgtcgatggcgtgcgcctg
gtgtacacgccggcgccgggctacgtgggcgtggacagcgtgcactacaccgccatcggc
gccggcggcagttcggccccggccgtggtcaccatcaccgtcaacgcccgccccatcgcg
gtgtcggtgacggtgccggcggtgaccgggcagacgcagaccctggacgtcacccgcgac
gccaccggcggtccgttcgtggcggccgccgtggtcgcggtgctgccggccaacgccggt
accgcgacgatcacccgcgcggccgccagggccgccggcgtgccgaccgcggccgcggac
gacggcccgggcttcatactgaccttcgtgccgaacccggccttctccggcaacgccacg
gtgcgcttcaccctgtctaatgcatacgcgacctcggccgcggcggacatcgtgttcgtg
atcgcgccgcgccgggatccgacccaggatgcgcaggtgcgtggtctgatcgacgcgcag
gccgagtcgacccggcgcttcgccaaggcgcagatcgacaacttccagcgccgcctggag
gcgacccaccggggtgcgcgcggcttcgacaacggcgtgagcttccaggccagctcgcag
tgccgccagcgcgaccgcacgctgcagagcgatcgcaacctggacgcgcaagcgtgcgac
ccggccaaccgcgacctgcgcgacggcgccatggacggcggcgccgacaccgcgtcggcg
gcaccacgcgatgccactgcggcaggcgatctgggcctgtgggtgggcggtgcgatccgc
tccggcagcctggacaagcagtcgcagcgtgccggcgtggacttccagaccgatggcctg
agcctgggcgccgactatcgcgtgtccccggtctttgcgctgggcgcgggcgtgggcttc
ggccgcgacgacagcgacgtcggccgcgacggcagccacagcaagtccaccgcgtacacg
ctggcgctgtatgccagctaccacccgggccagaccctgttcttcgacaccttggtcggc
taccagttgctgtcctacgacctgcgccgctacgtcaccgacaacggcgcgctggccgaa
ggcgaccgcagcggccaccagtggatcgcgtcgctgtcggccggtgccgacctgcagcgc
ggcgattggcagatcaccccgtacgcgcgggtggatgccgcgcgcgccacgctcgacgcc
tacagcgaagcggcgatggcgccgtatgcgctgcgctacgaggacatggacgtggccacc
accaccggcaacctcggcctgcgcctggaatggcgccggcagatgacctggggacggctg
acgccgcagttccggctcgagtaccagcacgacttccagggccgcggcgacgccacgctc
gggtatgccgacatcgtcggcggcaccctgtaccgcaccgggcagagcgtgtacgaccgc
aaccggctgatgctgggcgtgggcgtggtgttcagcaccgaccagggcctgtccacgcgc
gtggaataccgcggcgtcaccgacggcgacagcggcagcgaccagacctggatgttcaac
gtcgagaagaagtactga
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