Xenopus tropicalis (tropical clawed frog): 100137097
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Entry
100137097 CDS
T01011
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
Motif
Other DBs
NCBI-GeneID:
100137097
NCBI-ProteinID:
XP_002939403
Xenbase:
XB-GENE-957401
UniProt:
A0A6I8R3C5
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Position
2:79199388..79241204
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AA seq
1190 aa
AA seq
DB search
MSVACVLKRKTVLWQDSFSPHLKQYPEGTLNHNMPVVLTSGPVGQQQPLQPPTHSALATG
PHASPVGGSMGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAE
HQVRSMDELNHDFQALALEGRAMGEQLLTGKKFWEPDDSNKDGPKGIFLGDQWRESTWGA
SDHSVSQPIMVQRRPGQGFHVSSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGA
FGPRDTEGDENEKVDKKNKGVYEGDKLGDLKEEVDSMDKSNGLPVQNGIDGDVKDFSRTP
GNCQASSNEVDLLGPSQNGSEVLAQLTNNNSAKPVEDFGGIESQSVQIDPMEHVGMEPLQ
FDYQGNQVQVDSGAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGM
FSAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPANLF
QQQAAAAAAASNSASQQNNQQSQQGQQQVLRAGGNQRPLTPNQNQQGQQTDQLVAAAAVN
SALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNTGARNGLGGPVRLVAPAPVIISPSAA
QAAVAAAAASANGPGGTANGPFRQLNSQQPQGQPQPQGNQNLASSSFYGNSSLNSNSQSS
SLFSQSSGQPGNSSLGFGSSGSLGATLSSALGGFGTAVANSNTGSGSRRDSLTGSSDIYK
RTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPNHSQTPPPSLSSHGSSTSLNLGGLT
NGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRN
NRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFG
NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRE
LDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEH
CLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHK
FASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ
RKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGMDLGPMCGPSNGII
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagaggaaaaccgttctctggcaggactccttcagcccc
cacctcaaacagtacccagaaggaacccttaaccacaatatgcccgtggtccttacctct
ggaccggtgggccagcagcagccactgcagccccccactcattctgccttggcaacagga
ccccatgccagccctgtggggggctctatgggagtggctggacgttcacaggatgacgcc
atggtggattatttcttccaaaggcagcatggggagcagcttggaggtggcgggagtggt
ggaggaggttacaataatagcaagcatcgctggcccactggtgataacatccacgcagag
catcaggttcgttcaatggacgagctaaatcatgattttcaagcacttgcattggaagga
agagcaatgggagaacaactgttgacgggcaaaaaattttgggaacctgatgattcaaac
aaggatggaccaaaaggcatttttcttggggaccagtggcgagagagcacatggggggct
tcagatcattcagtttcccaaccaattatggtgcagcggaggcctggccaaggctttcat
gtcagcagtgaggtgaactctgttctaagccctcgatctgagagtggtggcttgggtgtc
agcatggtagaatatgtgcttagctcctcgcctggagactcatgcctgcggaaaggagcc
tttggtccacgagacacagagggagatgaaaatgagaaggtggacaaaaaaaacaaaggt
gtctatgagggggacaaattaggagatctaaaagaggaagtagacagcatggataaatcc
aatggcttaccagtccaaaatgggattgatggagatgtaaaggatttcagccgtacacca
ggaaactgtcaagcctcatcaaatgaagtagacctccttgggcccagccagaatggctca
gaagtgcttgcccaattgactaataacaatagtgccaaaccagtagaggattttggtggc
attgagtctcagagtgttcagatagatcccatggagcatgttggcatggaaccactgcag
tttgactaccagggcaaccaagtacaagtagattcaggagctgccactgtgggcctattt
gactacaattcacagcaacagctattccaaagaccaaatgctctggcagttcagcagctg
acagctgcacaacaacaacagtatgcactcgcagcagcgcatcagccacacataggtatg
ttttcagcaggtttagctccagctgcctttgttccaaatccctacataataagtgcagcg
ccacctggaacagacccctatgcagcagggctggcagcggcggcaacacttggtccagct
gttgtccctcaccagtactatggagtgacgccttggggggtgtatccagccaacctcttt
cagcagcaagcagcagctgctgctgcagcaagcaactctgcttcacagcagaataatcaa
cagagtcaacagggccaacagcaggtgctacgtgcagggggcaaccagagaccattaaca
cccaaccaaaatcagcaggggcaacaaactgaccagctggtggcagcagctgcagtgaat
tctgcacttgcctttggacaaggactagctgcaggaatgccaggataccctgtgcttgca
cctgctgcttactatgatcagacaggtgccctggttgtgaatactggagccaggaatggt
ttgggtgggcctgttcgtctagtggcaccagcacctgttatcatcagcccttcagcagca
caagcagctgttgcagcagctgctgcctctgcaaatggtccaggtggtaccgctaatgga
ccctttcggcagttaaactctcagcagccacagggccagccacagcctcagggcaaccag
aatctagcatccagctcattctatggcaacagctctctgaacagtaactcacagagcagc
tcattgttctcacagagctctggtcagcctgggaacagttctttgggatttggcagcagc
ggttctttaggagccacactgagttcagctcttggtggatttgggactgcagttgcgaat
tccaacactggcagtggatctcgtcgtgactctctgactggcagcagtgatatttacaaa
agaacttctagcagtctgacacccataggtcacagcttctacaatggactgggcttttca
tcttctccaggtcctgtgggaatgccacttcccagtcagggtcccaatcactcccaaaca
ccacctccatccctgtcttctcatgggtcctccaccagcctcaatcttggaggtttaaca
aatggcagtgggcgatatatttctgctgcaccaggggcagaggcaaagtacagaagtgcc
agcagtgcatctagcttgtttagcccaagcagcactctcttcccatcctcccgcttgcgc
tatggaatgtcagatgtcatgccctctggacgaagcagactacttgaagatttcaggaac
aaccgctacccaaatttacagttgcgagaaattgctggccacattatggagttttcccaa
gaccagcatggatcaaggtttatacagttaaagctggagcgagctacacctgcagagaga
caactggtgttcaacgagatccttcaagcagcttatcaacttatggtggatgtatttggg
aattacgtcatacagaaattttttgagtttggcagcctagaacagaagcttgctcttgct
gaacggattcgtgggcatgtactttcactggcgctacaaatgtatggatgtcgggtgata
cagaaggcactggagtttattccccctgatcagcaagttattaatgaaatggtcagagag
ttggatggtcacgtcttgaagtgtgtaaaggaccagaatgggaatcatgtggttcaaaaa
tgcatagagtgtgtacagccgcagtcccttcaattcattattgatgccttcaagagccag
gtatttgcactctctacgcatccgtatggctgtcgagtgatccagcgaattttggagcac
tgccttccggagcagacactgcccattttagaagagttacaccagcacacggaacagctt
gttcaggatcagtatggtaactacgttatccagcatgttttggagcatggtcgaccggag
gacaaaagtaaaattgttgcagagattcgtggaaatgttctagtcctgagtcagcacaaa
tttgccagtaatgtagttgaaaaatgtgtgacacatgcgtctcgtacggaaagagccatg
cttatagacgaggtgtgcacaatgaatgatgggcctcatagtgccttatacaccatgatg
aaggaccagtacgctaactacgttgtacagaaaatgatcgatgtagcagaaccagctcag
cgcaagattgttatgcacaagatccgaccacatattgccactctccgtaaatacacgtat
ggcaagcacatcctggccaagttggagaagtactacatgaaaaacggcatggatctgggt
ccaatgtgtggaccctcaaatggaatcatttag
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