Xenopus tropicalis (tropical clawed frog): 100189547
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Entry
100189547 CDS
T01011
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5 precursor
KO
K04664
growth differentiation factor 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04060
Cytokine-cytokine receptor interaction
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100189547 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100189547 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xtr04052
]
100189547 (gdf5)
Cytokines and neuropeptides [BR:
xtr04052
]
Cytokines
Transforming growth factors (RSTK binding)
100189547 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
DUF6178
Motif
Other DBs
NCBI-GeneID:
100189547
NCBI-ProteinID:
NP_001128589
Xenbase:
XB-GENE-481784
UniProt:
B5BNX6
LinkDB
All DBs
Position
10:12951620..12955250
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AA seq
496 aa
AA seq
DB search
MKVLKYIPLLLWYLIWDYLDLVPLVLGHSEQSHPGTKVGIAGTGGKERNPLPKVNATRTG
ILGHGVGLQKGRSKVPLVQSRIFLSKNEDIKKQAASRANPHVKTGNAENRQSGEKIETPR
PPHVTSKASTKLINIHADSAGFKPKRPPNPLTEKEQKDAFKHPLITPHEYMLSLYRTLSD
VERKGINGSLKLEAGLANTITSFIDKGQDERMAAARRQKYTFDISALEKDGLLGAELRIL
RKRPIDAKLNSAGKLWQIKLYSCPANKKSATLLDSRPLGSIDTPKWEVFDIWKLYKNFKN
SVQLCFELEVLDKGKPADLRSVGFNRTGRQTNEKAIFLVFGRTKKRDLFFNEIKARSGQD
DKTVYEYLFNQRRKRRAPLSTRQGKRPNKNSKARCSKKPLHVNFKDMGWDDWIIAPLEYE
AYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPETTPPTCCVPTRLSPISILYTDSANNV
VYKQYEDMVVESCGCR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactgaaatatattcctttactgctttggtatctgatttgggactacctggat
ttggttcctttggtactgggccattctgaacaaagtcatccaggaacgaaagtaggcatt
gctggaactggaggaaaagagagaaacccattaccaaaggtcaatgcaaccaggactgga
atcttgggtcatggagttggtcttcaaaagggtaggtccaaggttccccttgttcaaagt
agaatctttctgtctaagaatgaggacatcaaaaaacaagctgccagcagagctaatcca
catgtcaagaccggaaacgctgaaaataggcaatctggggaaaagattgagaccccaagg
cctccacatgtaaccagtaaggcctctaccaaactcataaatatccatgcagattctgca
ggattcaaacccaagaggccaccaaacccgctgactgaaaaagagcaaaaagacgctttc
aagcaccccttaattactcctcatgaatacatgttatcactgtaccggactctgtcagac
gttgaaaggaaaggcatcaatggaagcttgaaactcgaggcaggattagccaatactatc
actagcttcattgacaagggtcaagatgaacggatggcagcagcaaggcggcaaaagtac
acttttgacatcagtgctttggaaaaagatggcttattaggagcagaactgcgtattcta
cggaaaaggccgatcgacgctaaacttaactcagctggcaaactgtggcagattaaacta
tacagttgcccagcgaacaaaaaatccgctacccttctggattctcggcctctcggcagt
atcgatacaccgaaatgggaggtctttgacatatggaagctttataaaaattttaaaaac
tctgttcagttgtgctttgagcttgaagttctggataaggggaaacctgcagatttaaga
agtgtgggatttaacagaacaggaagacagaccaatgagaaagctatttttctcgtcttt
ggtaggacaaagaaacgggacttattcttcaatgagattaaagccaggtctggccaagat
gacaaaactgtctatgaatatttatttaatcagaggagaaagagacgagctcctctgtca
actcggcaagggaagaggccaaacaagaattccaaagcaagatgtagcaagaaaccactt
catgtcaattttaaggatatgggttgggatgattggattattgcacctttggagtatgag
gcatatcattgtgaagggctttgtgagttccctctgagatctcatttagagcctaccaac
catgcagtgatccaaacattaatgaattcaatggacccagagactacgccacctacctgt
tgcgttccaaccagactaagcccaataagcatcctttacacagactctgccaacaatgtg
gtgtataaacaatatgaagatatggttgtggagtcctgtggttgtaggtag
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