Xenopus tropicalis (tropical clawed frog): 100270675
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Entry
100270675 CDS
T01011
Symbol
cd40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 precursor
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04060
Cytokine-cytokine receptor interaction
xtr04514
Cell adhesion molecules
xtr04620
Toll-like receptor signaling pathway
xtr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100270675 (cd40)
04514 Cell adhesion molecules
100270675 (cd40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100270675 (cd40)
04672 Intestinal immune network for IgA production
100270675 (cd40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xtr04050
]
100270675 (cd40)
04090 CD molecules [BR:
xtr04090
]
100270675 (cd40)
Cytokine receptors [BR:
xtr04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100270675 (cd40)
CD molecules [BR:
xtr04090
]
Proteins
100270675 (cd40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Comm
TMEM154
RPC5_C
Motif
Other DBs
NCBI-GeneID:
100270675
NCBI-ProteinID:
NP_001138688
Xenbase:
XB-GENE-5963241
UniProt:
B8YI06
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Position
10:20129016..20159999
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AA seq
279 aa
AA seq
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MRFLLLFLLLLLSCSHKGVALTCKNTEYLRDGKCCSLCSPGKKVSQECDAQIDTVCENCR
SGEFQDKWNRETSCHQHAYCDPNAGKKEVTKGTAERNVECLCQIDRHCSGPTCEICLKNT
PCSPGNGVTQTATSTSDTQCSPCAEGTFSNTTSYNDPCISWKSCGNEESELFPGNSTSDK
VCRMKPQRSHIWIIVLSLIFVVLITMALCFVSKKYGIFQRKKEKQQFQEPVKLKRIPIED
NDPEADPMEDCYSLPDTTAQGLPVAQEQGKDSHMSQEEQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagatttctgctgctttttctgctattgcttctgagctgcagccacaagggggttgcg
cttacatgcaagaatacagagtacctgagggatgggaaatgttgcagtctttgtagtcca
ggaaaaaaagtctcccaggaatgtgatgcccaaatagataccgtttgtgaaaactgcaga
tctggagagttccaagacaaatggaaccgagagacctcttgccaccagcatgcctattgt
gacccaaatgctgggaagaaggaggtcactaaaggcactgcagaaaggaatgttgagtgc
ctgtgtcagattgatagacattgttctggcccgacatgtgagatttgtttaaagaataca
ccttgtagccctggaaatggagtcacacaaacagcaaccagcacttctgacactcagtgt
tccccatgtgcagaggggacattctctaataccacgtcttacaatgatccatgcattagc
tggaaaagttgtggaaatgaagagagtgaactattccctgggaacagcaccagtgacaaa
gtttgcagaatgaagccacaaaggagccatatttggattattgtgctcagtctgatattt
gttgttctgataacaatggcattgtgctttgtttcaaagaaatatgggatttttcagagg
aagaaagaaaagcaacagtttcaggaaccagtgaaacttaagcgaattccgatagaggac
aatgatcctgaagctgaccctatggaagattgctactctttgccagataccacagcacaa
ggactaccggtggctcaggaacagggaaaggacagccacatgtctcaggaagaacaataa
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