Xenopus tropicalis (tropical clawed frog): 100493671
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Entry
100493671 CDS
T01011
Symbol
lrrc4
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100493671 (lrrc4)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
V-set
Ig_2
LRRNT
Ig_6
LRRCT
DAG1
Herpes_gE_N
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
100493671
NCBI-ProteinID:
XP_002939414
Xenbase:
XB-GENE-968937
UniProt:
A0A8J0QV53
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Position
3:88625448..88630305
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AA seq
641 aa
AA seq
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MNFLWLVTVHHTWKAVLFSAIYLMVHMWISCAAYSGPQSCPSVCSCSNQFSKVVCTRRGL
SEVPQGIPSNTRSLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLN
TLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEY
ISEGAFEGLYNLKYLNLGMCNIRDMPNLTPLVGLEELEISGNNFPEIKPGSFHGLRSLKK
LWIMNSQINTIERNAFDDLTSLVELNLAHNNVTSLPHDLFAPLKYLVELHLHHNPWDCDC
DVLWLSWWLREYIPTNSTCCGRCHSPPHMRGKYVVEVDHSMFQCSAPFIMDAPRDLNISE
GRMAELKCRTSAMSSVRWLLPNGTVLTHASNHPRITILNDGTLNFSQVLLTDTGVYTCMV
TNVAGNSNASAYLNVSTAELNTSNYSFFTTVTVETTEVAPEDISMIFKPVPTTSTGYQPA
YTTTTTVLIQTTKMPKQVAVPTSDAGDKMQTSLDEVMKTTKIIIGCFVAVTLLAAAMLIV
FYKLRKRHQQRSTVAAARTVEIIQVDEDIPSGSPTGVSGEGAVVLPTIHDHMNYNTYKPA
HHGAHWTANSIGNSLHSTITTISEPYIIQTHTKEKVQETQI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttgtggctggtaactgtgcaccatacctggaaggctgtcctattctctgca
atctacctcatggtgcatatgtggatctcctgtgcagcatactctgggcctcaaagttgc
ccatctgtctgttcctgcagtaaccagttcagcaaggtcgtatgcacacgtcgtggcctc
tctgaagtaccccaaggtataccatcaaacacaagatccctcaatctcatggagaacaac
atacagatgattcaggctgacacgttccgtcaccttcatcatttggaagtgctacaactt
ggcaggaactctatacgtcagatagaggttggggcttttaatggtttggccagcctcaat
actctggaattgtttgacaactggttgactgtaattcccagtggggcatttgagtatctt
tccaaactgagagaattgtggctcaggaataatcctattgaaagtattccatcttatgcc
ttcaatcgggtaccatctttgatgcgcctggaccttggagagttaaaaaaactggagtat
atttctgagggggcttttgaaggattgtataatctgaagtatcttaaccttgggatgtgt
aatatcagagacatgccaaaccttacaccattggtgggactagaggaactagaaatttct
gggaacaactttcctgagataaaaccaggatcttttcacggtttgagatcactgaaaaaa
ttgtggattatgaactcgcagatcaacaccatagagcgtaatgcttttgatgatttgaca
tccttggttgaattgaatttggctcacaacaatgtgacctccctgccacatgaccttttt
gcccctctaaaatatttggtggaattacacttgcaccataatccatgggactgcgactgt
gatgttctttggctttcctggtggctgagagagtatattcccaccaattccacatgttgt
ggtcgttgccattccccgccgcacatgagggggaagtatgtggtggaggtggaccattca
atgtttcagtgctcagccccttttataatggatgctcctagggatttgaacatctctgaa
gggagaatggcggagctcaagtgtagaacttctgccatgtcctctgttaggtggctattg
cccaatggaactgtgttgacccacgcttccaatcatccgcgaatcaccatccttaatgat
gggacattaaacttctcacaggtcctgctcactgatactggtgtctacacatgcatggta
acaaatgtggcgggaaactctaatgcttcagcttatctcaacgtcagcacggcagagctt
aacacttccaactatagtttcttcacaactgtcactgtggagacaacagaggtggctcct
gaagacatctctatgatattcaagccggtgccaaccacttcaacagggtaccagcctgca
tatacaactaccaccactgtactaattcagaccaccaaaatgcccaagcaggtggcggta
ccaacttcagatgctggagacaaaatgcaaactagccttgatgaggtgatgaagaccacc
aaaatcatcattggttgctttgtggcagtcacactgttagcagccgctatgcttattgta
ttctacaagctacgcaagcggcaccagcaaaggagcactgtggccgctgcgcggactgtt
gagataatccaagtggatgaggacatccccagtgggagtcccacaggagtatcaggtgag
ggggcagttgtactgcccaccattcacgatcatatgaactacaacacctacaagccagca
caccatggggcccattggacggctaacagtatcggtaattctctacactccacaattact
accatatctgaaccttatataattcagacccacacaaaagagaaggtacaggaaactcaa
atatga
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