Xenopus tropicalis (tropical clawed frog): 100495225
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Entry
100495225 CDS
T01011
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain
KO
K06751
MHC class I antigen
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
xtr04145
Phagosome
xtr04218
Cellular senescence
xtr04514
Cell adhesion molecules
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100495225
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100495225
04145 Phagosome
100495225
09143 Cell growth and death
04218 Cellular senescence
100495225
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100495225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100495225
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xtr00537
]
100495225
Exosome [BR:
xtr04147
]
Exosomal proteins
Proteins found in most exosomes
100495225
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xtr00537
]
Antigens
100495225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
ig
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
100495225
NCBI-ProteinID:
XP_031746689
UniProt:
A0A8J1IMD3
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Position
8:complement(134204839..134226532)
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AA seq
381 aa
AA seq
DB search
MAGILPLVFLIFSLGTSVVYSGSHTLHYDVTIVSAPTPGVPRYLVSMYVDGVQYGKYNSD
IRHAEALYPSLRALSEHIERQTQYAQEHEMRQRHRLNFLKGYLNTKGNGNIYQRRLACEL
YEDGTIGGYEEIAFDGKEFFSFDKERVVYVPVTQEAAMLSYLWNIRYDPTDTKIYMENDC
IEHIKLYLPYISTDLEKKIPPKVKVSSSESESGTKLHCRVYGFYPRDVEVKWIKNGRDEI
HSEEAAQILPNPDGTYQIRVSVGVTLDKNSNYSCLVDHSSLETPMIVNFVPNNGRHLYFI
ISASVILGIFIYRKRMTKDSQGSHEPVSIGGESLNTDAHPEAQEEQITDSPPEGLENSNE
ILRKVEKRDLPFYIKQVLKPQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctggtatcctccctctggtgtttctgatctttagcctggggacttctgttgtgtat
tctggaagtcacactctacactatgatgtcactattgtatcagcaccgacccctggggtc
cctcggtatttagttagcatgtatgtagatggcgtgcagtatgggaagtacaacagtgac
atacgccatgccgaggctttatatccgtccctgagggcactttctgagcacatagaaagg
caaactcagtatgctcaggaacatgaaatgaggcaaagacacaggctgaattttctaaag
ggatatttaaatacaaaaggtaatggtaatatctaccagaggaggcttgcctgtgagctg
tatgaagatggcaccattggtggatatgaggagattgcctttgatggaaaggagtttttc
agtttcgataaggagagagtggtgtatgtgcctgtaacacaggaggctgcgatgttatcg
tacctatggaatatacgttatgatcccactgatactaagatatacatggagaatgactgc
attgagcatataaagctgtatctcccttatatatccactgacttggagaagaaaataccc
cccaaagtgaaggtttccagctcagagtcagagagtggcaccaaactgcactgccgggtg
tatgggttctacccccgagatgtggaagtgaagtggataaagaatgggagagatgagatt
cactcagaggaggcagcacagatcctgccaaaccctgatggcacctatcagatcagagtc
agtgtgggggtaacactagacaaaaatagtaactattcctgccttgtggatcacagcagt
ttggagacccccatgattgtaaactttgtacccaacaatggaaggcatttgtatttcatc
atttctgccagtgtgatcctgggaatatttatatacagaaagagaatgacgaaagactct
caaggcagccatgaacctgtgagtatcggtggggagagcttgaacactgatgcccaccca
gaggcgcaggaagagcagataactgatagcccgccggagggattagaaaactctaatgag
attttacgaaaagttgaaaagagggatttgcctttttatatcaagcaagttttaaagcct
caatga
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integrated database retrieval system
