Xenopus tropicalis (tropical clawed frog): 116409533
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Entry
116409533 CDS
T01011
Name
(RefSeq) protocadherin gamma-B7-like
KO
K16496
protocadherin gamma subfamily B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
116409533
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Protocadherins
116409533
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
116409533
NCBI-ProteinID:
XP_031754055
UniProt:
A0A8J1JAL3
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Position
3:complement(28272129..28275609)
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AA seq
819 aa
AA seq
DB search
MGKSMIKYRVTKRTKRWQVIFCFLLFLCESVICQLQYSIYEEQRLGYVIGNIANDLGVSA
EELSSRKFHIVSRSKKQYLNVHLENGDLYVADRIDREDLCEMQQNCFLNIEAVMENPLHF
YTINVEIQDVNDNAPSFSKDIFDIGISESAALGAHFALGSAQDPDLGNNSIQSYKLSAND
YFGLLEKVNTDGRKYPELVLEKPLDREKKNSSVLILSAFDGGTPSKTGTSLIKIVVTDVN
DNYPLFNKDTYRVTISENAPIGFLVIDLHATDADEGSNAHITYILNDIPKKALEIFAINP
LNGSVQVTGKLDYEVATKYEMTVEAKDGGGLVSYCKLLIQVSDVNDNAPDILITSFSDTI
PEDSPVGTVIALVNLDDLDSGENGEVVGQIPESLPFHLISSSGNYYKLVTSMDLDREKTS
EYNITIKVEDKGSPQLTNSKTIRLILTDVNDNAPVFDHINYVAYIQENNPSGSSFFRVHA
TDPDINENGKVIYMILTNNIEDIPISSYISINTVSGVLYAQRSFDYEKLREFYIQVMAKD
SGSPFRSANATVKICITDQNDNAPKILYPSQDSEAASVFEFIPHFSTKGYLVTKVVAVDA
DSGHNAWLSYHLLQVPDPSFLIIGQNTGEIRITRDLQETDALRQRIVVMVKDNGYPMLSS
TVTLNLVVAENFQQVLPEITNQHIETESPSNATFYLVISIALISILFIFTVLLAVISKCR
KQSSPTALHPLSRDLYPQVALRCPSVFSDGTLPFPYTYDVCVTLDSRQNEVAYLKPVQNV
PTDNLIDTDDSVSANDPPKDNLISASIAQLFIGIALGVI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagtatgatcaaatacagagtcaccaaaaggacaaaaagatggcaagtaata
ttttgctttttgttattcctttgtgagtcagttatctgtcagctccagtactcaatatat
gaagaacagaggctgggatatgtaatagggaatattgcaaatgatctgggtgttagtgct
gaagaactgtcctcacgtaaattccacattgtttctcggtccaaaaaacagtatttaaat
gttcatttagagaatggagacttgtatgttgcagatagaatagacagagaggatttatgt
gaaatgcaacaaaattgttttctaaatatcgaggcagttatggaaaaccctttacatttc
tacacaatcaacgtggaaattcaggatgttaatgataatgcacctagcttttcaaaggat
atttttgatattggtattagtgaatcagctgcactaggagctcactttgctttaggaagt
gcacaagatccagatcttggtaataattctattcagagttataagctcagtgcaaatgat
tattttggactgctggaaaaagttaatacagatggaaggaaatatcccgagcttgttttg
gagaaacctttggatcgtgagaaaaagaactcatcagttctaatattatctgcttttgat
ggagggacaccttcaaaaactggaacatctttgattaaaattgtggttaccgatgtaaat
gataattatcccttgtttaacaaggacacctatagagtaactattagcgaaaatgctcca
attggattcttagttatagatctacatgcgactgatgcagatgaaggttctaatgctcac
attacatatatattaaatgacattccaaaaaaggctcttgagatatttgcaataaatcct
ttgaacggttctgttcaagtaactggaaaactggattacgaagtggcaacaaagtatgag
atgacagttgaggctaaggatggtggtggcctggtgtcttattgcaagttattaatacaa
gttagtgatgttaatgataatgctcctgatatattaattacatctttctcagatacaatt
ccagaagactccccagttggtacagtcatagcactagttaatttagatgacttggattct
ggggaaaatggagaggttgttggacaaatccctgaatctttgccttttcacttaatatca
tcaagtggtaattactataaacttgtaacctcaatggacttagatagagagaaaacatct
gagtacaacatcacaattaaagtagaagataaaggatcccctcaactaaccaacagcaaa
accattcgattgattttaactgatgtgaacgacaatgcccctgtatttgatcatattaat
tatgttgcctatatccaagaaaataatccctcaggaagttccttttttagagtccatgct
acagatcctgatataaatgagaatggaaaagtgatttacatgatccttactaataatatt
gaagacataccaatatcatcatatatttctattaatacagtaagtggagttttatatgca
cagcgctcatttgactatgaaaagttacgggaattttacatccaagtaatggctaaagac
tccggatctccttttcgaagtgctaatgccacagtgaagatatgtattactgatcagaat
gataatgctccaaagattctctatccttcacaagactcagaagctgcctcagtatttgaa
ttcattccacacttttctacaaaaggatatttagtgactaaagtagttgctgttgatgct
gattctggacacaatgcctggctctcttatcacttgcttcaagttcctgacccttctttt
ctcattatagggcaaaatacaggggaaatcagaataacaagagacttgcaggagactgat
gctctgaggcaaagaattgtagttatggtgaaagacaatggctatcccatgctgtcttct
acagttactctaaatctagttgtggctgaaaacttccaacaagttcttccagaaataaca
aaccagcacattgaaactgaatctccatcgaatgcaacattttatcttgtcatctctata
gctttaatttccattttatttattttcacagttctacttgctgtcatttcaaagtgcaga
aaacaaagttctccaactgctctgcatcctctaagcagagacttgtatcctcaagttgcg
cttagatgcccttctgtttttagtgatggaactttaccttttccgtacacatatgatgtc
tgtgtaactctggactcaaggcaaaatgaggttgcatatcttaaacccgtccagaatgtt
ccaacagataatcttattgatactgatgactctgtttctgcaaatgatcctccgaaggac
aatttaatttctgccagcattgcacagctctttatcggtattgcactgggtgttatttga
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