Xenopus tropicalis (tropical clawed frog): 394829
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Entry
394829 CDS
T01011
Symbol
ubqln1
Name
(RefSeq) ubiquilin-1
KO
K04523
ubiquilin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
394829 (ubqln1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
394829 (ubqln1)
03051 Proteasome [BR:
xtr03051
]
394829 (ubqln1)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
394829 (ubqln1)
Proteasome [BR:
xtr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
394829 (ubqln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
YukD
Rad60-SLD_2
Dsc3_N
Ubiquitin_5
CUE
HOIP-UBA
SSP160
Motif
Other DBs
NCBI-GeneID:
394829
NCBI-ProteinID:
NP_989221
Xenbase:
XB-GENE-986025
UniProt:
F6RXL5
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All DBs
Position
1:134064835..134076623
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AA seq
564 aa
AA seq
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MSDPPSSSTPSSSDPARIIKVTVKTPKEKEEFAVPENSSIREFKEDISKRFKSSTEQLVL
IFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRSQAATASQASSSSTSATNSTTSSSSTT
TTTTTGTPLGLGGLGGLAGLSSLGMNASNFSELQSQMQQQLMSNPEMMVQIMENPFVQSM
LSNPDLMSQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRA
LSNLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFASLVSNASNAGNQPSRTENRDP
LPNPWAPPSSTAGSTSTGSTTGANSTGSSTTTTTSSTLPNLGAGMFNTPGMQSLMQQITE
NPQLMQNMLSAPYMRSMMQSLSQNPELAAQVMQNNPLFSGNPQLQEQMRQQLPFFLQQMQ
NPETLSAMSNPRAMQALLQIQQGLQTLATEAPSLMPRTNPPFGGLGSPNSSPASVPSSAP
TENSSPLSGLSEPGHQQFIQQMLQALSGANPQNQNPNPEVRFQPQLEQLSAMGFLNREAN
LQALIATGGDINAAIERLLGSQPS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccccccaagttcctccaccccatcatcctcggaccctgcccgcatcataaaa
gtgactgtaaaaacccccaaggagaaagaggaatttgccgtacctgaaaatagcagcatc
agggagttcaaggaggatatctccaagcgctttaaatccagcacagaacaacttgtttta
atatttgctggaaagattttaaaagaccaggacacccttagccagcatggaatccatgat
ggattgacagttcaccttgtcatcaaaactcaaaaccgatcacaggctgcaacggcttct
caagcaagcagctccagcacatccgctaccaactctacaacatcaagcagtagtaccact
acaacaacaaccacaggcactcctcttggcttaggaggtctgggtgggctagcagggctg
agcagcctgggcatgaatgcatccaacttttctgaactccaaagtcagatgcagcagcag
cttatgtccaacccagaaatgatggttcagatcatggagaatccatttgttcagagtatg
ctttctaatcctgacctcatgagtcaattgataatggcaaatccacaaatgcaacagtta
atccagcggaatccagaaataagccatatgcttaataacccggatattatgcggcaaaca
ttagaacttgctagaaacccagcaatgatgcaagagatgatgaggaaccaggacagagcc
ctgagcaacttagaaagtatccctggtggttataatgccctgagaaggatgtatactgac
atacaggaacccatgctgaatgctgcccaagaacagttcggaggcaatccttttgcttct
cttgtaagcaatgcatcaaatgcaggcaaccaaccttctcgaacagaaaatagagatcct
ttaccaaatccatgggctcctccttctagcactgcagggtctacatccactgggagcact
acaggagcaaacagcacaggcagcagtaccaccactacaacaagctcaactctacctaat
ttgggagctggcatgtttaatactcctggcatgcaaagcttgatgcaacagataacagag
aatcctcagctgatgcagaatatgttgtctgcaccatacatgagaagcatgatgcagtct
cttagccagaaccctgaactcgcagctcaggtcatgcagaataatcctctcttttctgga
aatcctcaactgcaagaacagatgagacagcagcttccatttttccttcaacaaatgcag
aaccctgaaactttatcagcaatgtcaaatccaagagcaatgcaggctttgctgcagatc
cagcaagggttgcaaacacttgctactgaagcaccatctctaatgccaagaacaaatcca
ccttttggtggactggggagtcctaattcatcacctgcaagtgttccttcctctgcgccc
acagaaaattcaagtccactgtcaggattatctgaaccagggcatcagcagtttattcaa
caaatgctgcaagccctttctggtgctaatccacagaatcagaatccaaatccagaagtt
aggtttcagccacagctcgaacaactaagtgcgatggggtttttaaacagagaagctaac
ttacaagctttaatagccactggtggagacatcaacgcagctattgaacgactactgggc
tctcaaccatcatag
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integrated database retrieval system
