Xylella taiwanensis: AB672_00020
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Entry
AB672_00020 CDS
T05568
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
xtw
Xylella taiwanensis
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtw03032
]
AB672_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_00020 (gyrB)
Enzymes [BR:
xtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB672_00020 (gyrB)
DNA replication proteins [BR:
xtw03032
]
Prokaryotic type
DNA Topoisomerases
AB672_00020 (gyrB)
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB672_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AXI82477
UniProt:
Z9JNA5
LinkDB
All DBs
Position
5261..7705
Genome browser
AA seq
814 aa
AA seq
DB search
MTEKQNAPLLSNGSAYDSSKITVLRGLDAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVD
EALAGHADNILVKIHVDGSVSISDNGRGIPVDIHKEEGVSAAEVILTVLHAGGKFDDNSY
KVSGGLHGVGVSVVNALSERLWLDIWRDGYHYQQEYALGEPRYPLKQLEVSAKRGTTLRF
KPAKEIFSDVEFHYENLARRLRELSFLNSGVKISLIDERGEGRRDDFHYEGGIRSFVEHL
AQLKTPLHPNVISVTGEHNGIAVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAAL
TRTLGNYIEHNGIARQAKITLSGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVKPAV
EATFGLRLEEFLQENPNEARAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLAD
CQEKDPAMSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERVRFDRMLASAEVGT
LITALGTGIGKDEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHVYI
GLPPLYKLKQGKSELYLKDDIALNVYLANSAIDGAQLFPAEGEPPIEGVALEKLLITYIA
AKDTIARHSHRYDSRLLEALLEFVPLDSTYFQSYTNDDHLRFLMARLNRASLGTPRYILK
MQAADEQHSAALLATRYHMGEELIQVLQLSVLETGELRPLYEAAKLLHGLIRNGAKIVRG
NKSQSIECFGDAQAWLLEEAKKGRQIQRFKGLGEMNPEQLWDTTVNPDTRRLLQVCIEDA
IAADQIFSTLMGDVVEPRRDFIEDNALKVTHLDI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaacagaatgccccgctgcttagtaatggcagtgcatatgactcaagtaaa
attacagtactgcgtggactggatgctgttcgcaagcgtcctgggatgtatatcggagat
gtccatgacggtactggtttgcaccacatggtatttgaagttgtcgataactcggtggat
gaggcattggctggtcatgccgataacattctagtcaagattcatgttgacggatcagtt
tcgatttcggataacggacgaggtattccagtagatattcataaagaagagggtgtttca
gccgctgaggtgattctgacggttttacatgccggtggtaagtttgatgacaatagttat
aaggtttctggtggtttgcatggggtgggggtgtcagtggtcaacgccctctccgaacga
ttatggctggatatttggcgtgatggttaccactaccaacaggaatatgctttgggcgag
ccgcgatatcctctcaaacaactagaggtatcagccaaacgtggtactacgctgcgtttt
aagccggcaaaagagattttcagtgatgtggagttccattacgagaatcttgcaagacgt
ctgcgtgagttatcgtttctcaattctggggtcaagattagcttgattgatgaacgtggt
gagggtcggcgtgacgatttccactatgagggtggtattcgtagctttgttgaacatttg
gctcaattgaagactccgttgcatccgaacgtaatttcagtcacaggtgaacacaacggt
attgctgtggatgtggctttgcaatggacggatgcgtatcaagaaacgatgtattgtttt
acaaataacatcccgcaaaaagatggtggtactcacctcgctggcttccgtgctgcgttg
actcgtacgttgggtaattatatcgagcacaacgggattgctagacaagccaagattact
ttgtctggtgatgacatgcgtgaagggatgattgcggtgttatcggtaaaagtccctgat
cctagtttttcttcccaaactaaggagaagttggtgagctccgacgtcaagccggcagtg
gaagccaccttcggcctgcgtttggaggaattcttacaagagaatcctaacgaagcacgt
gccattactggaaagattgtcgatgctgctcgtgctcgcgaggctgctcgtaaagcgcgt
gacctaactcgtcgtaagggtgcgcttgatatcgccggtttgccaggcaaattggctgat
tgccaagagaaagaccctgcgatgtcagagctgtttattgttgaaggcgattctgctggt
ggttctgccaagcaggggcgcaaccgtaaaaatcaagcagtattaccgctccgaggtaag
attcttaacgttgaacgtgtacgttttgaccgtatgctagcgagtgccgaggtcggcaca
ctgatcacagcccttggaacaggcattggtaaggacgaatacaacccagataagctgcgt
tatcatcgtatcattatcatgaccgatgctgatgtggatggttcgcatattcgtacttta
ttgctgacctttttttaccggcaaatgccagaactgattgaacgtggtcatgtctacatt
ggcttaccacccttgtacaaactaaaacaaggtaagagtgagctctatttaaaggacgat
atcgcactgaatgtttatttggcgaatagtgcgattgatggagcgcagttattccctgct
gaaggcgaaccaccaattgagggtgtggcgttggagaaattgctgattacatacattgcc
gctaaagatactatcgctcgtcattcgcatcgttatgactcccgcctactggaagcgttg
cttgaatttgtccccttggattcgacttattttcagtcctacactaacgacgaccatctg
cggtttcttatggcacgcttgaaccgggccagcttgggtactccgcgttacattctgaaa
atgcaggctgctgatgaacaacactctgcagcattattggcaactcgctatcacatgggt
gaggagctgatccaagtgttgcaattgtccgtgttagagactggcgagttacgtccattg
tacgaggctgccaagttgctgcacggattaattcgcaacggcgccaaaatcgttcgtggt
aacaaatcgcaatcaattgagtgttttggtgatgctcaagcctggttgcttgaggaggcg
aagaaaggtcgccaaatccagcgctttaagggtctgggtgaaatgaatccagagcagcta
tgggatactacggtgaatccggatacccgccgtcttttgcaagtctgcattgaagatgct
atagctgccgaccaaatcttcagcaccctgatgggcgatgttgttgagccacgccgtgac
tttattgaggacaatgcattgaaagtcacccatttggatatttaa
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