Xanthomonas vasicola pv. vasculorum: C7V42_01975
Help
Entry
C7V42_01975 CDS
T05388
Name
(GenBank) type III secretion system effector XopAE
Organism
xva
Xanthomonas vasicola pv. vasculorum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Turandot
Motif
Other DBs
NCBI-ProteinID:
AVQ05597
LinkDB
All DBs
Position
complement(440589..442244)
Genome browser
AA seq
551 aa
AA seq
DB search
MAEQVRIGLNLHDGVSDTSRVVLQDVANAIRRAATSRSTELVINYGLPARTLPDAVGRLD
ALQTLTLAHTGLASLPDSLGQLQQLRHLQVFGATGLKKLPPSLTHLSNLKTLELMNAPLD
ELPADLGRMQGLRRLALGGVHCERLPASIVELGRLTELRMMYSSHLRELPENIGRMQGLR
SLEVTSNSKLEQLPGSLTQLHRLKRLNLSSNRGLAHLPEDIGRLSGLKELSLKNCAALQR
LPDSVADLAQLQLLDLRGTGLQTLPPWLARLPAGCDIKVADHLAGQLLRIRDPEHEQRAA
QRRAQRAAQRMADRPRHAPVPTAQQAGASWNRFREFTGVLRGVDAELGKRFEKWTRGLEQ
DAGLFAAHIRPADMTLLDQVVAEAIRSPEFRTSFDQFLSDHTVKRLNLDGMTQVGGFGRA
VLGDVTTAFAEMLKHKIMHTQNHETALGLLQEALQNPALELSRERLLRSRNALTGRSEMW
PPLKAYISMHDEQGEAAQDAATTWATAQFEEAQEGGIGDAEAKQESEQAQANANRFIEER
ARKLIKEWHIR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagcaggtccgaatcggcctcaacctccatgacggggtaagcgatacgtcgcgg
gtggtgctgcaggacgtggcaaacgcaatccgccgtgcagcgaccagccgaagcaccgag
cttgtcatcaactacggccttcctgccaggacgctgcctgatgcggtcggccggctcgac
gcgttacagacattgacgctggcccataccgggcttgcgtcgctgccggacagcctggga
cagctgcagcagctccgccatctgcaagtttttggcgctacgggcctgaaaaagctgcca
ccttcgttgacgcacctgtccaatctgaaaaccctcgaattgatgaatgccccgttggac
gagctgcccgcagacctggggcgtatgcaaggtctgcgccgcctcgcgctaggcggcgtg
cactgtgagcgcctgccggccagcatcgttgaactgggccgattgaccgaattgcgcatg
atgtactcgtcgcatttgcgcgagttgcctgaaaacatcggccgtatgcaggggctcagg
tcgctggaggtaacatcgaactccaagctggagcaacttccaggcagcctcacccagctg
catcggctgaaaagactcaacctctcctccaaccgcgggctggcgcacttgcccgaggac
atcggtcgactgagcggcttgaaggaactgtcgctgaaaaattgcgccgcgctccagcgg
ttgcccgacagcgtggcggatcttgcccagctgcaactgctggacctgcgcggcaccggc
ctgcagacccttccaccgtggctggcacgactgcccgctggctgcgatatcaaggtggcg
gatcatctggcaggccaattgctgcggatccgcgacccagagcacgagcagcgcgcggca
cagcgccgggcacagcgcgcggcacagcggatggccgacagaccgcggcacgcgcccgtg
ccgacggcgcaacaggccggggcgtcctggaaccgcttccgcgagttcacgggcgtgttg
cgcggtgtcgatgccgagctgggcaagcgttttgaaaagtggacgcgggggctggagcaa
gatgccgggctcttcgccgcacacatcaggcccgccgacatgacactgctcgaccaagtg
gtggccgaggccattcgttcacccgaattccgcacaagcttcgaccaatttttgagcgac
cacaccgtcaagaggctcaacctggatggcatgacgcaagtgggcggtttcggtcgcgcc
gtgctaggagacgtcacaaccgcgtttgctgagatgctcaagcacaagatcatgcacacg
cagaaccacgagaccgcactgggcctgctgcaggaagccctgcaaaatcccgcgttggag
ctgtccagggagaggctgctgcgcagcaggaatgcactcaccgggcgttcggaaatgtgg
ccgccattgaaggcctacatctccatgcacgatgagcagggagaagcggcgcaggatgcg
gcgaccacgtgggcgacggcgcagttcgaggaagcgcaagagggtggcatcggggacgca
gaggcaaagcaggagtccgaacaggcgcaggccaacgcgaaccgcttcatcgaagagcgg
gcgcgtaaactgatcaaggaatggcacatccgttag
DBGET
integrated database retrieval system
