Xanthomonas vasicola pv. vasculorum: C7V42_07080
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Entry
C7V42_07080 CDS
T05388
Name
(GenBank) glycoside hydrolase family 2 protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00052
Galactose metabolism
xva00511
Other glycan degradation
xva00600
Sphingolipid metabolism
xva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
C7V42_07080
09103 Lipid metabolism
00600 Sphingolipid metabolism
C7V42_07080
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
C7V42_07080
Enzymes [BR:
xva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
C7V42_07080
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Invasin_D3
BetaGal_gal-bd
Motif
Other DBs
NCBI-ProteinID:
AVQ06405
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Position
complement(1532177..1534744)
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AA seq
855 aa
AA seq
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MSGINRRELLRGMLASGVSAALPAGAAGALVSAGAAAAPSAAKNSATTTALGDAALAPRE
RLLFDFGWRFHLGHASDAARDFEFGTFQRTFAKAGKDTATAAQPGFDDSAWQQVDLPHDW
AVSLPFRQEPISASMAEEDPAAAHGYRPLGTSFPENSVGWYRRTLQIPASDLGKRISLVF
DGVFRECIVFCNGHIVGRNASGYCGFEVDLSEVLDYGKPNIIAIRVDATLGEGWFYEGAG
IYRHLWLQKTNPLHLPQDGVFVRSSVQDGNATAQLSTEVRNDGTAPRQCMVQARITAPDG
RTVAQAASAAVTVAPGQVQIVEQALPLGQAALWSIDTPQLYSLTTSVHSDGAAVDALVTP
FGVRSIAFDAQRGFLLNGTPLKLHGTNNHQDHAGVGTAIPDALHEWRLRQLKSMGCNAYR
SSHNPATPELLALCDRLGMFVIEETRRMSTDLEAMGELETMVRRGRNHPSVILWSLGNEE
PQQVTERGARIVARMQQRVRQLDPTRPTTFAMDKGFGDGVGQVVDVVGFNYRTSQMDGFH
AQYPNIPIYGSETGSTVSVRGNYQRDDKRGYTRAYDLDHPWWASTAEAWWSYVAQRPYIA
GGFIWTGFDYRGEPTPYNRWPNVASQFGVLDSCGFPKDNYWYYRAQWTSEPVLHLFPHWN
WDGLLQPDDHGRIEVWCHSNLEAVELLVNGVSQGLQQVPAYGHVEWRVVYAPGVIEARGY
RGGKTVLTERRETVGKPAAIRLNCDRSNLHADAEDVAVVKVEIVDAQGRLVPTADNHVQF
ALRGPARLIGVGNGDPSSHEDDKAPQRKAFNGLCAALLQTTRNSGDIVLQATAPGLTSAT
LRLHAGVTKLRAAVV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatcaatcggcgcgaattgctgcgcggcatgctcgccagtggggtgagcgcc
gcattaccggcaggcgcagccggcgcattggtctcggcgggcgcagctgccgcaccttct
gcggcgaaaaacagcgcaacgaccacagcattaggcgatgcagcgctggcaccgcgtgag
cgactgctgttcgatttcgggtggcgcttccacctgggccatgccagcgatgcagcgcgc
gatttcgaattcggcaccttccagcgtaccttcgccaaggcaggcaaggacaccgcaacc
gccgcgcaaccggggttcgacgacagtgcctggcagcaggtggacttgccgcacgactgg
gctgtcagcctgccgtttcggcaggagccaatctcggcctccatggccgaggaagacccg
gccgctgcacacggttacaggccgttgggcacaagtttcccggagaacagcgtgggctgg
tatcggcgcaccttgcagattccggcaagcgatctgggcaagcgcatcagcctggtgttc
gatggcgtgttccgcgagtgcattgtgttctgcaacggccacatcgtcggccgtaacgcg
agcggctattgcggcttcgaagtcgacctcagcgaagtgctcgactacggcaagcccaac
atcatcgccatccgcgtggatgccacgctgggcgaaggctggttttatgaaggcgccggc
atctatcggcatctgtggctgcagaagaccaacccgctgcatctcccgcaagatggcgta
ttcgtgcgcagcagcgtgcaggatggcaatgccactgcacagctttccaccgaagtgcgc
aacgacggcaccgcgccacgccagtgcatggtgcaggcgcgcatcaccgcaccggatgga
cgcaccgtggcgcaggcggccagcgcagccgtcacagtcgcgcctggccaggttcagata
gtcgaacaggccctgccgctcgggcaggccgcgctgtggtcgatcgacaccccgcagctc
tacagcctgaccaccagcgtgcacagcgacggcgcggcggtcgatgcgctggtcacgccg
ttcggcgtgcgcagcatcgccttcgatgcgcaacgcggtttcttgttgaatggcacaccg
ctcaagctacacgggaccaacaatcaccaggatcatgcaggggtcggcaccgccattcca
gatgcattgcacgaatggcgactacgccagctcaagtcgatgggctgcaacgcctaccgc
agctcgcacaacccggccacgccggaattgctcgcgctgtgcgaccgcctcggcatgttc
gtgatcgaagaaacccgccgcatgtccaccgacctagaagcgatgggcgaactggaaacc
atggtgcggcgcggccgcaatcatcccagcgtcatcctgtggtcgctcggcaacgaagag
ccgcagcaggtcaccgaacgcggcgcgcgcatcgttgcccgcatgcagcaacgcgtgcgc
caactcgaccccacccgccccaccaccttcgcgatggacaagggcttcggcgatggcgtg
ggccaagtggtggatgtggtcggcttcaactaccgcaccagccagatggacggcttccac
gcgcagtaccccaacatcccgatctacggcagcgaaaccggcagcaccgtatcggtgcgc
ggcaactatcaacgcgatgacaaacgcggctacacccgcgcctacgacctggaccacccc
tggtgggccagcaccgccgaagcctggtggagctatgtcgcgcagcgcccgtatatcgcc
ggcggcttcatctggaccggcttcgactaccgcggcgaacccacgccctacaaccgctgg
ccgaatgtggcctcgcaattcggcgtgctcgatagctgcggcttcccgaaggacaactac
tggtactaccgcgcgcaatggaccagcgaaccggtgctgcatctgtttccgcactggaac
tgggacggcctgctgcagcccgacgaccatggccggatcgaagtctggtgccacagcaat
ctcgaagcggtggagctgctggtcaacggcgtcagccagggcctgcagcaggtaccggcc
tacgggcatgtcgaatggcgcgtggtctatgcgcccggcgtgatcgaagcgcgcggctat
cggggcggcaagacggtgctcaccgaacgccgcgaaaccgtcggcaagccagcggcgatc
cgcctgaactgcgatcgcagcaatctgcacgcggacgccgaagatgtggccgtggtgaag
gtggaaatcgtcgacgcacaaggccgtctggtgccaaccgcagacaaccatgtgcagttc
gcgctgcgcggccctgcccggctgattggcgtcggcaatggcgaccccagcagccacgaa
gatgacaaggcaccgcagcgcaaggcattcaacggcctgtgtgcggcgctattgcagacc
acgcgcaacagcggcgatatcgtgctgcaggcgaccgcgcccggactgacctcggccaca
ctgcgcttgcacgcaggcgtcacgaaattgcgtgcggcggtggtttga
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