Xanthomonas vasicola pv. vasculorum: C7V42_18370
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Entry
C7V42_18370 CDS
T05388
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00521
Streptomycin biosynthesis
xva00523
Polyketide sugar unit biosynthesis
xva00541
O-Antigen nucleotide sugar biosynthesis
xva01100
Metabolic pathways
xva01110
Biosynthesis of secondary metabolites
xva01250
Biosynthesis of nucleotide sugars
Module
xva_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
C7V42_18370 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C7V42_18370 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C7V42_18370 (rfbC)
Enzymes [BR:
xva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
C7V42_18370 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AVQ08265
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All DBs
Position
complement(4044611..4045168)
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AA seq
185 aa
AA seq
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MKVIQTRLPGCLLIEPAVYDDGRGYFFESWNAERFAKHGLPANFVQSNVSSSSKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAIDIRHGSPHFGQWVAALLSAENNRQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISNPLLSAKDAAAPFLADVPAERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtgattcagacacggttgccgggttgcctgctgatcgaaccagcggtatatgac
gatgggcgcgggtacttctttgaaagctggaatgccgagcgtttcgccaaacacgggctc
ccagcaaattttgtgcaaagcaacgtttcgagctcatcgaagggcgttctccgcggtctt
cactatcagtggccgcgcccgcaaggcaagctggttagcgtgctggaaggtgaggtctat
gatgttgcaatcgatatcaggcacggctctccgcacttcggtcaatgggtagccgcacta
ttgagtgcggagaataatcggcagttctggattccagaagggtttgcccacggctttgca
gtgctgtcggagcgagcagtgttcagctacctatgcaccgacgtctacgtgaaagaggcc
gatgccggcgtgcgctgggatgatgcggcgattggtatcgattggccgatcagcaatccg
ttgctttctgcaaaggacgccgctgcgccgttcctggccgatgtgcccgccgaacgcttg
ccggtgtatacgccgtga
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