Xanthomonas vasicola pv. vasculorum: C7V42_22115
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Entry
C7V42_22115 CDS
T05388
Name
(GenBank) autotransporter domain-containing protein
Organism
xva
Xanthomonas vasicola pv. vasculorum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
SprB
Big_9
Cadherin_5
NtrZ
Chlam_OMP6
Motif
Other DBs
NCBI-ProteinID:
AVQ08874
LinkDB
All DBs
Position
complement(4860408..4865186)
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AA seq
1592 aa
AA seq
DB search
MYTNCTGTGGLRLALRWLMAVMLLATSHVAMAAYCTSPQSATVNSGGSVTFDVSSCDGPD
NFGMSDGAPPSHGSATLTGQLDGAGTERVTYTNNGDGATSDSFYLLDQDNNQVVFNITIN
PSRSASIAVSPSSANEDSGNSFVYTVTLSQTNTSATTVNLTRSGTATSGADYSGAVTSVV
VPANTSSASFTVTPIADTTVEADETVTFSVASGTGYSTGSPASATATIVNDDFPVASIAV
SPASVTEDGVTNLLYTVTLDQRSPSALSIGFGVSGTATSGTDYAAVSSPLVIAAGQTTGT
ITIDPTADTTVEPDETVVISLNTGSGYTVGSPNSATGTILNDDLPVLSINDVSVNEGDAG
TTNATFSVSLSAPAGADGVSFDIATADGTATAGADYVASSLTGQTIPAGSSSATFTVLVN
GDTLAEPNETFFVNVSNVTGATVSDGQGLGTIINDDAQPALSIDDVSVNEGNSGTTTATF
TVSLSAASGQTVTVNYGTADGTATAGSDYVARSGTLSFAPGVTTQNVAITVNGDTAVEPN
ETFSVGLSGVSNATIARATGTGTILNDDAVVTISPASLPAATAGSAYSQTLTASGGTPGY
TFVVSAGALPAGLTLNASGVLSGTPTASGSFNFTVTATDNGAPTSGSRAYTLTVAGANVT
LPATTLPAGTAGQAYSSAITPATGGIAPYSYALTAGALPAGITLNSSSGALSGTTTSVGG
FSFTVTATDSTTGSSSQGTQSYILTITAPTIAVAPSAVPTATRGTAYSQTLSASGGMAAY
SYAITSGALPAGITLASNGTLSGTATVEGTFNFTVQATDANSFTGAQAYSLTVAGPNLVL
PASALPAGTAGQAYAAAVTPATGGTAPYRYAVTAGALPGGVVLDAATGDLSGTPTVSGTF
TFTLTVTDSTPSPAAQASRSYALTINAATLVLAQPTLPAAVRGTAYNQVLTASGGIAPYR
YSIASGALPAGLTLASDGTLSGTPTVQGTSSFTIAVADAGNASATQAYTFTVSDAAPVAV
ADVTATMTDTAVTAAVTANDTGSITAIAIATAPTNGTAVVNGLELVYTPNAGFVGTDVLS
YTASGAGGTSAAVTLTITVNARPVAVSVTAAAVPGEAQQVDLTRNATGGPFVAAAVVAVL
PASAGTATITRAGGTARAAAARASGPSPAAAAMAETPTFMLTFTPNPAFVGQATVQFTLS
NAFATSAPASVVFTIAPRRDPSVDAEVRGLIDAQSESTRRFARAQIDNFQRRLEATHRGG
VSFTNAVSFQPTSHCRQADRGISAQPCSPDTQEADNDFRDAPAVTSTTGSSAQTQGDLGL
WVGGAIRSGSLNRQTNSNGVDFQTDGLSVGADYRVAQSLAIGAGLGWGRDDSDVGSNGSH
SKATAYTMALYASFHPGKAFFFDTLVGYQLLSYDLRRFVTDDSSLAEGNRDGKQWIASLS
TGADLQRGTLQITPYARVDVARATLDGYVEEGVAPFALRYADMDVATTTGNLGLRLEWRR
EVAWGRLTPQLRVEYQRDFQGRGDATLSYADLTGGPFYRTAQSAFDRNRLMVGIGAALLT
GQGLSTRLEYRGITDGDSNNDQTWMINLEKKY
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgaattgcaccggcacgggcggcttgcgcctggccctacgttggctgatggcg
gtgatgctgttggcgacctctcatgtcgcgatggccgcctattgcacgagtccgcagagc
gcaaccgtcaattccggcgggtcggtgacgttcgacgtcagtagttgcgatggccccgac
aactttggcatgagtgacggtgcaccaccgtcgcacggtagcgccaccctcaccggtcag
ctcgacggcgcaggcactgagcgggtgacatataccaacaacggggatggcgcgacctcg
gactcgttctatctactggaccaggacaacaaccaggtcgtcttcaacatcaccatcaac
ccctcgcgtagcgcgagcattgcggtttcgccgtccagcgccaacgaggacagcggtaac
tccttcgtctacacagtgacgctgagccagaccaacacctcggcgaccacggtcaacctg
acgcgcagcggcaccgcaaccagtggcgcggattactccggcgccgtcaccagcgtggtg
gtgccggccaataccagctcggccagcttcaccgttacccccatcgccgacaccacggtg
gaagccgacgaaacggtgaccttcagcgtcgccagcggcaccggttattccaccggcagc
cccgccagcgccaccgccaccatcgtcaacgacgattttcccgtcgcctcgatcgcggtg
tccccggccagcgtgaccgaggacggcgtcaccaacctcctctacacggtcaccctggac
caacggtccccctcggcgctgtccatcggctttggcgtgagcggcaccgcgacctcgggc
accgactatgcggccgtgagttcaccgctggtgatcgccgccggccagaccaccggcacc
atcaccatcgatccgaccgccgacaccactgtcgagcccgacgaaaccgtggtgatcagc
ctcaataccggcagcggttacacggtcggttccccgaacagcgccaccggcaccattctc
aacgacgacctgccggtgctgtcgatcaacgatgtctcggtgaacgaaggtgatgccggc
accaccaatgccaccttcagcgtgtcgttgagtgcgccggccggcgccgacggcgtcagc
ttcgatatcgccaccgccgatggcaccgccactgcgggcgcggactatgtcgcctccagt
ctgaccgggcagaccatccccgccggcagcagcagcgccaccttcaccgtgctggtcaac
ggcgacacgctggccgagccgaatgaaacgttcttcgtcaacgtcagcaacgtcaccggt
gccaccgtgagtgacgggcagggcctgggcacgatcatcaacgacgacgcgcagccggcg
ctgtcgatcgacgatgtgagcgtcaacgaaggcaacagcggcaccaccacggccaccttc
acagtgagtctgagcgctgccagcggccagacggtcacggtcaactacggcaccgccgac
ggcaccgccaccgccggcagcgactatgttgcgcgctccggcacgctgagctttgcgccc
ggcgtcacgacgcagaacgtggcgatcaccgtcaacggcgacacggccgtcgaacccaac
gaaaccttcagtgtgggcctgtccggcgtcagcaacgcgaccatcgcccgcgccaccggc
accggcaccatccttaacgatgatgcagtggtgacgatctcgccggcgtcgctgcccgca
gcaaccgcaggcagtgcttacagccagacgctgaccgccagcggtggcaccccgggttac
accttcgtggtcagcgctggcgcattgcccgccggactgacgttgaacgcttccggagtg
ttgtccggcacgccgaccgccagcggcagcttcaacttcaccgtgaccgcgaccgacaat
ggagcgccgactagcggcagccgcgcctataccctcaccgtggccggcgccaacgtgacc
ttgccggccaccaccttgccggccggaaccgcgggccaggcctattcgagcgcgatcact
ccggccaccggcggcattgcgccctatagctacgcgcttaccgccggcgcgttgcccgcc
ggcatcacgctcaacagcagtagcggggcgttgagcggcaccaccaccagcgtgggcggc
ttcagcttcaccgtcactgcgaccgacagcaccaccggcagctcttcgcaaggcacgcag
agttacatcttgaccatcacagcaccgacgattgcggttgcgccgtccgcagtccccacc
gcgacacgtggcaccgcctacagccagacgctgagcgccagcggcggcatggccgcctac
agctacgcgatcacgagcggtgcattgccggccggcatcaccttagccagcaacggcacc
ttgtcgggcacggcgacggtggaaggcacgttcaacttcaccgtgcaggccaccgatgcg
aacagcttcaccggcgcacaggcatacagcctgactgtggctggcccgaacctggtgttg
ccggcgtcggccttgccggcagggaccgcagggcaggcctatgcggctgccgtcacgccg
gccaccggcggcactgcaccctatcgctatgcagtcactgccggcgcgctgccgggtggc
gtggtactggatgctgcaaccggcgacctcagcgggacgccgacggtgtcgggtaccttc
accttcaccctgacggtcaccgacagcacgcccagccccgccgcgcaggccagccggagc
tacgcgctgaccatcaacgccgcaacgctggtgctggcgcagcccaccttgccggcggca
gtgcgtggcaccgcttacaaccaggtgctcaccgccagcggtggcattgcgccgtatcgt
tacagcatcgccagcggcgcgttgccggccgggttgacgttggccagcgacggcacgctg
tcgggcacgccgacggtgcagggcacctcgtccttcaccattgcggtggccgatgcgggc
aatgccagcgccacccaggcctacaccttcaccgtgagtgatgcagcgccggtcgcagtg
gccgatgtcaccgccaccatgaccgacaccgccgtcaccgcggcggtcaccgccaacgac
accggcagcatcacggcaatcgccattgccaccgcacccaccaacggcacggccgtggtc
aacgggctggagctggtctacacgcccaacgccggctttgtcggcactgatgtgctgagc
tataccgccagcggtgccggtggtacctcggcagcggtgacgctgaccatcacggtcaac
gcgcggccggtggcggtgtcggtgactgcagcggcagtgccgggcgaagcgcagcaggtc
gatctgacccgcaatgcgaccggcgggccgttcgtggctgctgcggtggttgcggtgctg
ccggcatcggccggtaccgccaccatcacccgcgcgggcggtactgcccgcgcggcggcg
gcacgtgcctccggcccatcgccggcagcggctgccatggccgaaacgccgaccttcatg
ttgacctttacgcccaatccggcttttgtcggccaggccacggtgcagttcaccttgtcc
aacgcattcgccacctcggcaccggccagcgtggtgttcaccatcgcgccgcggcgcgac
ccgagcgtggatgcggaagtacgtggtctgatcgatgcgcagtccgagtccacacggcgt
ttcgcgcgggcgcagatcgacaacttccagcgccgtctggaagccacgcatcgcggcggc
gttagcttcaccaatgccgtgagcttccagccgacctcgcattgccgccaggccgatcgc
ggcatcagtgcgcagccatgcagcccggacacgcaggaagccgacaacgacttccgcgat
gcgcccgcggtgaccagcaccaccggcagcagcgcgcagacgcagggcgacctgggtctg
tgggtgggcggtgcaatccgttcgggtagcttgaaccgccagaccaacagcaacggcgtg
gacttccagaccgacggcttgagcgtgggtgccgactaccgcgttgcgcagtcgctggcg
atcggtgcgggcctgggttgggggcgcgacgacagcgacgtgggcagcaacggcagtcac
agcaaggccaccgcctacacgatggcgttgtatgccagcttccatccgggcaaggcgttc
ttcttcgacaccttggtcggctaccagctgctgtcgtacgacctgcgccgctttgtcacc
gatgacagctcgctggccgagggcaaccgcgacggcaagcagtggatcgcttcgctgtcc
accggtgccgacctgcaacgcggcacgctgcagatcactccgtacgcgcgggtggatgtg
gcacgcgcaacgctggatggctatgtggaagagggcgtggcgccgttcgcgctgcgttat
gccgacatggatgtggccaccaccaccggtaacctcggtctgcgtctggaatggcgtcgc
gaagtcgcgtggggacgcctgaccccgcagttgcgcgtggagtatcagcgcgacttccag
ggccgtggcgatgccacgctgagctacgccgatcttaccggcggcccgttctatcgcact
gcgcagagcgcgttcgatcgcaaccggttgatggtgggcatcggtgcggcgttgctgacc
gggcaaggcctgtcgacgcggctggaataccgcggcatcaccgacggcgacagcaacaac
gatcagacctggatgatcaatctggaaaagaaatattga
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