Xanthomonas vesicatoria: BJD12_19960
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Entry
BJD12_19960 CDS
T04741
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve00071
Fatty acid degradation
xve00280
Valine, leucine and isoleucine degradation
xve00310
Lysine degradation
xve00362
Benzoate degradation
xve00380
Tryptophan metabolism
xve00410
beta-Alanine metabolism
xve00640
Propanoate metabolism
xve00650
Butanoate metabolism
xve00907
Pinene, camphor and geraniol degradation
xve00930
Caprolactam degradation
xve01100
Metabolic pathways
xve01110
Biosynthesis of secondary metabolites
xve01120
Microbial metabolism in diverse environments
xve01200
Carbon metabolism
xve01212
Fatty acid metabolism
Module
xve_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BJD12_19960
00650 Butanoate metabolism
BJD12_19960
09103 Lipid metabolism
00071 Fatty acid degradation
BJD12_19960
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BJD12_19960
00310 Lysine degradation
BJD12_19960
00380 Tryptophan metabolism
BJD12_19960
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BJD12_19960
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BJD12_19960
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BJD12_19960
00930 Caprolactam degradation
BJD12_19960
Enzymes [BR:
xve01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BJD12_19960
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BJD12_19960
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BJD12_19960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
Pyr_redox_2
ApbA
AlaDh_PNT_C
UDPG_MGDP_dh_N
MORN
Motif
Other DBs
NCBI-ProteinID:
APP77118
UniProt:
F0BD36
LinkDB
All DBs
Position
complement(4581273..4583354)
Genome browser
AA seq
693 aa
AA seq
DB search
MLPGFDGLRFSHWQADLREDGVLVLSLDRQGAPVNAFSQEVLLELGALVERLALDPPKGV
VLRSAKTNGFIAGADLKEFQDFDRKGTVNDAIHRGQQVFQKLAELPCPTVAAIHGFCMGG
GTEIALACRYRVASDDASTRIGLPETKLGIFPGWGGSARLPRLIGAPAAMDLMLTGRTVS
AKAARAMGLIDKVAAAAVLVDVAAALALNGTTRPFKQRATAWATNTLLARKLLAPQMRKQ
VARKARKEHYPAPYALINVWERAGGSGIQARLAAELKAVVKLASTPTARNLIRIFFLTER
LKALGGKDAGAAALPPIRHVHVIGAGVMGGDIAAWAAYKGFEVTLQDREQRFIDTALTRS
GELFAKRVKDDAKRPAVAARLRGDLAGAGVAQADLVIEAIIENPQAKRDLYQSIEPQLKP
DAVLTTNTSSIPLTELRGHIQRPAQFAGLHYFNPVAMMPLVEIVQHDGLDPANVARLAAF
CKALDKFPVPVAGTPGFLVNRVLFPYLLEAATAYAEGIPGPVLDKTAVKFGMPMGPIELI
DTVGLDVAAGVGAELAPFLQLPIPAALATVESGKRGKKDGQGLYKWENGRAVKPEVASGY
AVPPDLEDRLILPLLNEAVACLHDGVVADADLLDAGVIFGTGFAPFRGGPIQHIRSVGAD
ALLERLQALHARYGERFAPRPGWDSPVLREPVV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaggtttcgacgggctccgattcagccattggcaggccgacctgcgcgaggac
ggcgtgctcgtgctcagccttgatcgccagggcgcaccggtcaacgcgttttcgcaggag
gtgctgctcgaactgggcgcgctggtcgagcggctggcgctggacccgcccaagggcgtg
gtactgcgctcggcaaagaccaacggcttcattgccggcgccgacctgaaggaatttcag
gacttcgaccgcaagggcacagtcaacgatgcgatccatcggggccagcaggtgttccag
aagctggccgagctgccctgccccacggtggccgcgatccacggcttctgcatgggcggc
ggcaccgagatcgcgctggcgtgccggtatcgcgtggcctccgacgatgccagcacccgc
atcggcttgccggaaaccaagctcggtatcttccccggctggggcggcagcgcccgcttg
ccgcgcttgatcggcgcacctgcagcgatggatctgatgctgaccggacgcaccgtctcg
gccaaggctgcgcgggcgatggggctgatcgacaaggtcgccgcggcggccgtcctggtc
gatgtcgccgccgcattggccttgaacggcaccacgcgtccgttcaagcaacgcgctacc
gcgtgggccaccaatacattgctagcgcgcaagctgcttgccccgcagatgcgcaagcag
gtcgcacgcaaggcgcgcaaggagcattacccggcgccctacgccttgatcaacgtgtgg
gagcgcgcgggcggcagcggtatccaggcgcgccttgcggccgagctcaaggcggtggtc
aagctcgccagcacgccgaccgcgcgcaacctgatccgcatcttcttcctgaccgagcgg
ttgaaggcgctgggcggcaaggatgcaggcgcggccgcattgccgccgattcgccatgtg
catgtgatcggtgccggcgtgatgggcggcgatatcgcggcgtgggccgcgtacaagggc
ttcgaggtgaccctgcaggaccgcgagcagcgttttatcgataccgcgctgacgcgcagt
ggtgagctgtttgccaagcgggtaaaggacgacgccaagcggccggcggtggccgcgcgg
ctgcgcggcgatttggccggcgccggcgtggcgcaggcggatctggtgatcgaggcgatc
atcgaaaacccgcaggccaagcgcgacctgtatcagtccatcgagccgcagctcaagccc
gatgcggtgctcaccaccaatacctcgtcgattccgctgaccgagttacgtggccatatc
cagcgcccggcacagttcgccgggctgcactatttcaaccccgtggcgatgatgccgctg
gtggaaatcgtgcagcacgatggactggacccggccaacgtggcgcgcctggcggcgttc
tgcaaggcgctggacaagttcccggtgccggtggcgggtacgccgggcttcctggtcaat
cgcgtgctgtttccgtacctgctcgaagcggccactgcgtatgccgaaggcattccgggg
ccggtgctggacaagaccgcggtcaagttcggtatgccgatggggccgatcgagctgatc
gatacggtggggctggatgtcgcggccggcgtcggcgccgagctggcgccgttcctgcaa
ctgccgattcctgcggcgcttgccaccgtggagtccggcaagcgcggcaagaaggacggc
cagggcctgtacaagtgggagaacggccgcgcagtcaaacccgaggtggccagcggctat
gccgtgccgcccgacctggaagaccgcctgatcctgccgctgctcaacgaagcggtggcc
tgcctgcatgacggcgtggtggccgacgccgacctgctcgatgccggcgtcatcttcggt
actggctttgcgccgttccgcggtggcccgatccagcacatccgcagcgtcggtgcggat
gcgttgctcgaacgcttgcaggcattgcacgcccggtatggcgaacgcttcgccccgcgt
ccgggttgggattcaccggtgttgcgggagccggtggtatga
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