Xylophilus sp. GOD-11R: R9X41_22800
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Entry
R9X41_22800 CDS
T09600
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R9X41_22800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyg03400
]
R9X41_22800
Enzymes [BR:
xyg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R9X41_22800
DNA repair and recombination proteins [BR:
xyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R9X41_22800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WPB56929
LinkDB
All DBs
Position
complement(4935318..4936088)
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AA seq
256 aa
AA seq
DB search
MTAETSTLLLDDRRRAMLREMGVQVWLPRAVPVADVAAAPAPAAVAEVPVQPSTRTEAPR
VAEPPPAVVARQAPPPPVAAPAATSVPSSVASTASTVSNAVLRGDWLALSTPEGDDPQAP
VWLLLVDSPGADPRVGDAGRLLDAMLRAAGLHRGARVWAAGVGRAGEPGQALDEALGQAI
VARKPAMVLALGRLSAQAALGRNEPLGKLRGTVHRLEGAPLVASYEPAWLLRAQDDKARA
WEDLCRALAAVAEPRP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccgaaacctcgaccctgctcctcgacgaccgccgacgcgccatgctgcgcgag
atgggcgtgcaggtctggctgccgcgggccgtgcccgtagccgatgtggcggcggcaccg
gcccctgcggccgtcgccgaagtgcccgtccagccgtcgacccggaccgaagcgccgcgt
gtcgccgaaccgccgccggccgtcgtcgctcgccaggcgccaccgccaccggtggccgcg
ccggctgccacgagcgttccgtccagcgttgcttccactgcttccaccgtctccaacgcc
gtattgcgaggcgactggctggccctgtccacccccgagggcgacgatccgcaggccccc
gtctggctgctgctcgtcgacagccccggcgccgacccccgcgtgggcgacgccggtcgc
ctgctcgacgcgatgctgcgtgcggccggcctgcaccggggcgcgcgcgtctgggcggct
ggtgtcgggcgggccggcgagcccgggcaggcgctcgacgaagcgctcgggcaggccatc
gtggcccgcaagccggccatggtgctggcgctcggccggctgtccgcccaggccgctctg
gggcgcaacgagccactcggcaagctgcgcggcacggtacaccgcctcgaaggcgcaccg
ctggtggccagctacgaaccggcctggctgctgcgggcgcaggacgacaaggcacgcgcc
tgggaagacctctgccgggccctcgcggcagtggccgagccgcgtccgtaa
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