Yersinia alsatica: N0H69_06460
Help
Entry
N0H69_06460 CDS
T08521
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
yas
Yersinia alsatica
Pathway
yas02020
Two-component system
yas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N0H69_06460
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N0H69_06460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
yas02022
]
N0H69_06460
02035 Bacterial motility proteins [BR:
yas02035
]
N0H69_06460
Two-component system [BR:
yas02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
N0H69_06460
Bacterial motility proteins [BR:
yas02035
]
Flagellar system
Flagellar assembly proteins
Others
N0H69_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_7
HTH_30
AAA
MCM
AAA_3
DUF4092
nSTAND3
AAA_19
AAA_18
HTH_28
AAA_22
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UWM46459
LinkDB
All DBs
Position
1483951..1484994
Genome browser
AA seq
347 aa
AA seq
DB search
MMNMTMDMLSKSEHGFVANAPSSVSVFSLARRVAEFNVPVLITGETGTGKECVAKYIHQK
AMGNNSPYIAVNCAAIPESMLEAILFGYEKGAFTGAVASVAGKFEQANGGTLLLDEIGDM
PLALQVKLLRVLQEQEVERLGSHKRIPLDIRIIASTNKDLSVEIAEGRFRQDLYYRLSVV
PIHISPLRERPEDIMPLVMAFFNKYKSFLDVKINITPQAISELQTYPWPGNVRELENVIQ
RGIIMSNNGLIDIQNLGLTAINDSISTGNESVGNKAILSATDFEPTSNNSNIKLRGRLAQ
YQYIVDLLQRHQGNKSKTAAFLGITPRALRYRLANMREDGIDIECYS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatgactatggatatgttatctaagagcgaacatggttttgttgctaatgcg
ccctccagtgtgagtgtattttctcttgctcgtcgggtcgctgaatttaatgtcccagta
ttaattactggtgagacggggacgggtaaagagtgtgtggcaaaatatatccatcagaaa
gctatgggtaataattcgccctatatcgccgtaaactgtgcagcgattcctgaaagcatg
ctagaagcgatattgttcggttatgagaagggggcttttaccggggccgttgcgagtgtt
gccggtaaatttgaacaagctaatggcgggacattattactggatgagattggtgatatg
cctttggctctgcaagtgaaattgttgcgagtattgcaagagcaagaagttgaacgtctt
ggaagccataaacgtatccctctcgatatcagaataattgcttcaaccaataaagatttg
agtgttgagatcgctgaagggcgttttcgtcaggatctctattatcgtttgtctgtcgtc
cctattcatatttcccctttgcgggaacgaccggaagatattatgccgttggttatggca
ttttttaataaatataaaagcttcttggatgtaaagataaacattacccctcaggcaata
agcgagttacagacatacccttggccgggtaatgtgcgtgagctggaaaatgttattcag
cgcgggattatcatgagtaataacggactgatagatattcaaaatttgggtttgactgca
ataaatgactcaatttcgacaggaaatgaatcggtaggaaataaagcaatactttcagct
actgattttgaacctaccagtaataacagcaatattaagttacgtgggcggctggctcag
tatcaatacatcgtagatttactgcaacgacatcagggaaataaatccaagacagccgca
tttttaggtattaccccccgcgctttgcgatatcgactggccaatatgcgtgaagatggt
atcgacattgaatgttactcataa
DBGET
integrated database retrieval system
