Yersinia canariae: F0T03_18280
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Entry
F0T03_18280 CDS
T06446
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
yca
Yersinia canariae
Pathway
yca01501
beta-Lactam resistance
yca01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F0T03_18280
01503 Cationic antimicrobial peptide (CAMP) resistance
F0T03_18280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yca02000
]
F0T03_18280
01504 Antimicrobial resistance genes [BR:
yca01504
]
F0T03_18280
Transporters [BR:
yca02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
F0T03_18280
Antimicrobial resistance genes [BR:
yca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F0T03_18280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QHB33914
UniProt:
A0A857F3Y7
LinkDB
All DBs
Position
complement(3894072..3897197)
Genome browser
AA seq
1041 aa
AA seq
DB search
MLHFFIRRPKFAIVIALVITIVGWVSLHVIPVEQYPDITPPVVSVSAVYPGASARDVAQA
IASPLEAQVNGVSNMLYMESTSGNNGSYQLSITFASGTDPDMAAVEVQNRISQVSAQLPA
EVNENGISVRKRASNLLLGVSVFSPKQTHDALFVSNYTSIQLRDAIARINGVGDVQVFGA
RDYSMRVWLNPQRMESLNVSVQDIIAALQQQNVQAAAGQIGSSPSMPDQQQTLTISGQGR
LTDPQEFANVIIRSNPQGGMIRLGDVARVALGAQNYQVSAAQNQTESAFLVVYPVPGANA
LNVANGVRDEMARLSASFPPDLTYEINYDSTLPVTATLHEIALSLTLTLIVVLAVVYLFL
QSMRATFIVALTIPVSLLGTFAVLYVFGYSANTLSLFAIILALTIVVDDAIVVVENVERL
LSNDPNLTPAEATKQAMSQIAGPIIATTLVLMAVFVPIAILPGIVGELYRQFAVTLSAAV
ILSSINALTLSPALCAVLLKRRTLSNTGIFGGINRGLDSARDGYVALTGRISSRAVFSII
ALLLVGFATWWGYTRLPTSFLPEEDQGYFFVSLQLPDGASLNRTQTVMDQMYQQVTANDA
VEDVIKITGFSLLSGNNSPNAGFAIVMLKPWGQRPHIDQVLANIQANLAAIPSAMIMAVN
PPAIAGLGSASGFDLRIQALLGQTPQELAQVSQGIIFAANQDPKLSRVFTTFSASVPEVN
LSIDRSRAALLQVPVSRIFQTLQTSLGGMNAGDFTINNRMFRVQLQNDMDFRQRTAQINS
LNVRSDNGALVSLANLVILTPSVGAPFISNFNQFPSVAISGSAADGASSGQAMAAMEALL
AQNLPQGYSYSWSGMSWQEQQTGGQVVFIYLAALVFAYLFLVAQYESWSIPLVVILSVVF
AVGGAVAGLSVMGFANDVYAQIGLVLLIGLAAKNAILIVEFSKARREEGATIAQAAQDGA
KQRFRAVMMTAISFILGVMPLVFASGAGAMSRQIIGITVFGGMLMATAVGILFIPALYLH
IQRLREWTKKGKQPSDKDPQH
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatttctttatccgtcgtcccaaattcgccattgttattgcattggtgataacc
attgttggttgggtatcattacatgttattcctgtcgagcaataccctgatatcacgccg
ccagtggtgtcggtcagtgccgtttatcctggagccagcgcccgcgatgtggcgcaagct
attgcgtctccgctggaggcgcaggtcaatggtgtcagcaatatgctctatatggagtcc
accagtggcaataacggcagctatcaactgagtatcactttcgccagtggcacggatccg
gatatggcggcggttgaggtgcaaaaccgtatttctcaggtgagtgcccaactccctgcg
gaagtgaatgaaaatggcatttcggtgcgtaaacgggcctctaacctgctattgggggtc
agtgtcttttcaccaaagcagacccacgacgccctgtttgtcagtaactacaccagcata
cagttgcgtgatgctattgcgcgtatcaatggtgttggtgatgtgcaggtctttggggcc
cgcgattacagcatgcgtgtgtggttgaatccacaacgcatggagtcgctaaatgttagc
gtgcaagacattatcgctgcattacaacaacagaacgtacaggccgcggctgggcagatt
ggttcatcaccgtcgatgcccgaccaacagcaaactctgaccatcagtgggcaggggcga
cttaccgacccacaagaatttgccaatgttattattcgcagtaatccacaaggcggtatg
attcggctgggtgatgtggcccgtgtggcattaggggcgcagaattatcaggtcagtgcg
gcgcaaaatcagactgaatcggcattcttagtggtttacccggtacccggtgctaatgca
ttaaatgtggcaaatggcgtccgggatgaaatggcccgtctgtcggcctcttttccgccg
gatctgacctatgaaatcaattacgactccactttacccgtcaccgccaccttgcatgaa
attgcactctcactgaccttgaccctcattgtggtgctggcggtggtgtatctgttttta
caaagtatgcgggcgacttttattgtcgcgctcaccattccggtttcgctgttgggtact
tttgctgtgctgtatgtctttggttactcagccaataccctcagtttgtttgctatcatt
ttggccctgaccatcgtggtggatgacgccattgtcgtggtcgaaaacgtcgaacgccta
ttatcaaatgatccgaatctcacgccagcagaagcaaccaaacaggcaatgagccagatt
gccgggccaattattgccaccacactggtgctgatggcggtatttgtgcccatcgctatt
ttaccgggcattgtaggtgagctgtatcggcagttcgctgtcacactctcggccgccgtt
attttatctagtatcaatgcgttaacgctaagtccggcactgtgtgcggtattacttaag
cgccggacattgtcgaacactgggatatttggaggaattaaccgcggtttggacagtgcc
cgtgatggctatgttgcattgacggggcgaatcagtagccgtgccgtattcagtatcata
gccctgctattggtggggttcgctacctggtggggttatacccgcctgccgacctccttt
ttgccagaagaggatcaaggctatttctttgtcagtttgcaactgcctgatggcgcttct
ctaaatcgtacccagacggtaatggatcagatgtatcagcaggtaaccgctaacgatgct
gttgaggatgtcataaaaattaccggctttagcttgctcagcggtaataattctcctaat
gcgggttttgctattgtgatgctcaaaccttgggggcagcggccgcatattgatcaagtg
ttggcgaatattcaggctaatctggcggcgattccctcggcgatgatcatggctgtcaat
ccaccggcgatagccggtttgggcagtgcgtccggttttgatttgcggattcaagccctg
ctggggcagactccgcaggagctggcgcaagtcagtcaggggattatttttgctgccaat
caggatccgaaactgagccgagtgttcacgacattcagtgcttcagtacctgaagtcaat
ctgagtatcgaccgctcccgtgcggcattattacaagtgccggtcagccgcattttccag
acattacaaacctcactcggggggatgaatgccggtgatttcactatcaataaccgcatg
ttccgggtgcaattacaaaatgatatggatttccgtcagcgcactgcgcagataaatagt
ttgaatgtgcgcagtgataacggcgcattggtcagcctggcgaatctggtcattttgacg
ccgtcagttggcgcgccttttatcagtaatttcaaccagttcccttcggttgcaattagt
ggttctgcggctgatggggccagttcggggcaggcaatggcggcaatggaagcgctattg
gcgcaaaatttaccgcaaggctacagctatagctggagcgggatgtcatggcaggagcag
caaaccggcgggcaggtggtgtttatttatctggctgcattggtattcgcgtatctgttc
ctggttgctcagtatgagagctggagtatcccgctggtggtgattctgtcggtggtgttt
gctgttgggggggcggtagccgggttgtcagttatgggcttcgctaacgacgtgtatgcg
caaatcgggctggtactattgatagggttggcggccaagaatgcgatattgattgttgaa
ttctccaaagcccggcgggaagagggggcgacgattgctcaggcggcgcaagatggggcc
aaacagcgttttcgtgcggtaatgatgacggcaatttcatttattctcggcgtgatgccg
ctggtctttgccagtggtgcgggtgcgatgagccgccagattataggtattaccgtgttt
ggcggcatgctaatggccactgctgtggggatcttgtttatcccagcgctgtatctgcac
attcagcggctgcgtgaatggacaaaaaaaggcaaacaaccttctgataaagacccgcag
cattaa
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