Yersinia enterocolitica (type O 5) YE53/03: YE5303_12711
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Entry
YE5303_12711 CDS
T03739
Name
(GenBank) putative DEAD box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_12711
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
YE5303_12711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
zf-tcix
AAA_30
zf-ribbon_3
AAA_16
AAA_22
zinc_ribbon_2
UPF0547
SLFN-g3_helicase
AAA
DZR
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CCQ39976
LinkDB
All DBs
Position
complement(1755299..1757071)
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AA seq
590 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADGLDADIFAAGLQQRQSEGKVVFGSVQSVARNLSLFDSAFSLLI
IDECHRISDEDDSQYQQIIQHLRTTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDEK
SLFRDCIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREADLDRELKQQQ
RITPHIVSQIMEYAAHRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALITA
FKQQQLRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILD
YAGNPHDLFTPEVGTSKPHSDSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWF
EDDQGARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLR
CGGMSLEAGQDAKGEWLKITYYDEEGTNTSERFRLTTAAQRMAFEQIFLRPHQRAPGIAL
KWQTAADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYQGRFRRADSLA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcctttacgttacgcccttatcaacaagaagcggtagatgcgaccctcgctcatttt
cgccgccatgccgagcctgcgttgatcgtcttgcccacaggggccggtaaaagtctggtt
attgctgaattagcaaaattggctcgtgggcgcgttttagtactggcgcatgtcaaagaa
ctggtagcgcagaatcacgctaaatattgtgcttatggtttagaggcagacggtttagac
gccgatatttttgccgctggcctgcaacaacgccaaagtgaagggaaagtagtttttggt
agcgtacaatccgtggcgcgaaacctgtctctatttgatagcgccttttcactgttgata
attgatgaatgccatcgaatcagcgatgaagatgacagccaatatcagcaaattattcag
catttacgtaccaccaacccacgcctacgcttactggggctgactgccaccccctaccgt
ttgggtaaaggctggatctatcaattccactatcacggtattacccgtggtgatgaaaaa
tccctgttccgcgattgtatttatgaattacccctgcgttatatgattaagcacggcttt
ctggtaccaccggaacggctggatatgcccgtcgtgcaatatgatttcagccgcttgacc
agcaatagcgacggtatgttccgtgaagcggatttagaccgcgagcttaagcagcagcaa
agaattacccctcatattgtcagtcagataatggaatatgccgcccatcgacggggggtg
atgattttcgccgccaccgttgagcatgctaaagaggtctatgggctgttgcctaaaggt
gaggctgcgctggtcagtgccggaacaccaccggccgaacgggatgcgttaattaccgcg
tttaaacagcagcaattgcgctatttggtaaatgtcgcggtgctgaccaccggttttgat
gccccgcatgtcgatctgattgccattcttcgcccgaccgagtcagtcagtttgtatcag
caaattgtcgggcgcgggctgcggctctctccgggcaaagaagattgcctgattctggat
tatgctggcaacccccatgaccttttcaccccagaagtgggcaccagcaaaccccacagt
gacagccaaccggtgcaggtcttttgcccggactgcggctttgccaatattttctggggg
aaatgcactgagtccggcgagattattgaacactatggccgccgctgccagggttggttt
gaagatgatcaaggtgcgcgggcccaatgtgattaccgcttccgcttcaaatcctgccca
cattgtggtgcagaaaatgatattgctgctcgccgctgccatcagtgtcaggaggtgctg
gtcgatcccgatgacatgctcaaagccgcgttgaaattaaaagatgcactggtactgcgt
tgtggcgggatgagcctggaagccggtcaggatgcaaaaggtgagtggctaaaaatcacc
tattacgacgaagagggtaccaataccagtgagcgatttcgcttaaccactgccgcacaa
cgaatggcattcgagcaaattttccttcgtccacaccaacgggctccgggtattgcgctt
aaatggcaaactgctgcagatattatcgcccagcaagcgctattgcgttatcccgatttt
gttgtcgcccgccgtcgtgggcaatggtggcaaatcagggaaaaggtttttgattatcag
ggccgttttagacgcgctgattccctcgcctaa
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