Yersinia enterocolitica LC20: LC20_00612
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Entry
LC20_00612 CDS
T03179
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
yel
Yersinia enterocolitica LC20
Pathway
yel00250
Alanine, aspartate and glutamate metabolism
yel00310
Lysine degradation
yel00350
Tyrosine metabolism
yel00650
Butanoate metabolism
yel00760
Nicotinate and nicotinamide metabolism
yel01100
Metabolic pathways
yel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LC20_00612 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LC20_00612 (gabD)
00310 Lysine degradation
LC20_00612 (gabD)
00350 Tyrosine metabolism
LC20_00612 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LC20_00612 (gabD)
Enzymes [BR:
yel01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LC20_00612 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LC20_00612 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LC20_00612 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AHM71868
UniProt:
A0A7U4K000
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Position
545702..547183
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AA seq
493 aa
AA seq
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MSAQNSLRDPLQSQQQSDGVYHIGYFVGGSWHQAQSTFEVRNPATGALVAKVAKSGKAET
EAAIKAASEAFPAWRKTPAKQRAEILQRWYLLIMEHQQSLAEIMVSEQGKPLKEALGEVA
YAASFIQWFSEQAKRANGEIIPPAKEGARILATREPVGVVAAITPWNFPLAMLTRKLGPA
LAAGCTGLIKPANNTPLSAFALLALAEQAGVPAGVLNGVAGDTHAISDAIMDSPEVRKIS
FTGSTEVGKTLMRNAAATMKKISMELGGNAPYIVFDDADLDAAIAGAMACKFRNAGQVCV
CVNRFYIQDGVYDEFVNRLAVEVKKLKVGNGMDKDVNMGPLINLAGLEKVEDHVKDALEK
GGRLLAGGNRHELGGNFFQPTVIADATEQMKVASEETFGPLAACFRFNTEAEVIKRANNT
PFGLAAYFYTQNLQRVFRVSDALESGMIGVNESSVSTELAPFGGVKESGLGREGSVLGLD
EFMEVKTLHLGNL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagcacaaaactcattacgcgatccattacaatctcaacaacagagcgacggtgtt
taccatattggctattttgtcggcggttcctggcatcaggcgcagagcactttcgaggtt
cgtaaccccgccactggtgcattggtcgcgaaagtggcgaaatccggtaaagcggaaaca
gaagccgccattaaagccgccagcgaggcttttcccgcttggcgcaaaacgccagcgaaa
cagcgcgcagagattctacagcgctggtatttgctgataatggaacaccagcaatcattg
gcggagataatggtttctgagcaaggtaaaccattgaaagaagcattgggcgaggtggcc
tatgccgccagctttattcaatggtttagtgagcaggctaagcgtgccaatggtgaaatc
attccaccggccaaagaaggcgcgcgcattctggccacccgtgagccggtcggtgtggta
gcggcgatcacgccgtggaatttcccactggcgatgttgactcgtaagctggggccagcg
ctggcggcgggctgtaccgggctgattaaaccggctaacaacacaccgctctccgccttt
gctttgttggcgttggccgagcaagcgggggtgccggcgggcgtgcttaatggcgtcgcc
ggtgacacccatgctatcagcgatgccatcatggacagccctgaagtgcgtaaaatctcc
ttcaccggttcgactgaagtgggcaaaacgttaatgcgcaatgccgccgctaccatgaag
aaaatttccatggaattgggggggaatgcgccgtatatcgtgtttgacgatgctgattta
gatgccgccattgcaggggccatggcctgtaaattccgcaatgctgggcaagtgtgtgtc
tgtgttaaccgtttttatatccaagatggtgtctatgatgagtttgttaatcggttggcc
gttgaagttaagaaactaaaagttggcaacggcatggataaagacgtcaatatggggcca
ctgattaacctggcagggttggagaaagttgaagaccatgtgaaagatgcgcttgagaaa
ggcgggcgattattagccggtggcaaccgccatgaactgggtgggaatttcttccagccc
acggtcattgctgatgcgacagagcaaatgaaagtggcttctgaagagacatttggccct
ctggcggcctgttttcgtttcaatacagaagctgaagttattaaacgcgcgaataacacc
ccatttggattagcggcttacttttatactcagaacttgcagcgagtattccgggtttca
gacgcactggaaagcggtatgattggcgtgaacgaaagctcggtgtcgactgaattagcc
cctttcggtggcgtgaaagaatccggtcttggccgggagggctctgtgctggggctggat
gagtttatggaagttaaaactctgcatctgggcaatttataa
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