Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_02991
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Entry
Y11_02991 CDS
T02010
Name
(GenBank) DNA or RNA helicase of superfamily II
KO
K19789
DNA repair protein RadD
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yey03400
]
Y11_02991
DNA repair and recombination proteins [BR:
yey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Y11_02991
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA_22
UPF0547
AAA_16
SLFN-g3_helicase
zf-tcix
AAA
SNF2-rel_dom
DZR
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
CBY27882
UniProt:
A0A0H3NRZ2
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All DBs
Position
complement(303694..305451)
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLSLFDSAFSLLIIDECH
RISDEDDSQYQQIIQHLRTTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKSLFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREVDLDRELKQQQRITPH
IVSQIMEYAAHRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALITAFKQQQ
LRYLVNVAVLTTGFDAPYVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILDYAGNP
HNLFTPEVGTSKPHGDSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
AQAQCDYRFRFKSCPHCSAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGMS
LEAGQDAKGEWLKITYYDEEGTNTSERFRLTTAAQRMAFEQIFLRPHQRAPGIALKWQTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYQGRFRRADSLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttacgttacgcccttatcaacaagaagcggtagatgcgaccctcgctcatttt
cgccgccatgccgaacctgcgttgattgtcttgcccactggtgccggtaaaagtttggtt
attgctgaattagcaaaactggctcgcgggcgtgttttagtgctggcgcatgtcaaagaa
ctggtggcgcagaatcacgccaaatattgtgcttatggtttagaggctgatatttttgcc
gcaggcctgcaacaacgccaaagtgaagggaaagtggtttttggtagcgtacaatccgtg
gcgagaaacctatctctatttgatagcgccttttcactgttgataattgatgaatgccat
cgaatcagcgatgaagatgacagccaatatcagcaaattattcagcatttacgtaccacc
aacccacgcctgcgcctactggggctgactgccaccccctaccgcttaggtaaaggctgg
atctatcaattccactatcacggcatcactcgtggtgatgaaaaatccctgttccgcgat
tgtatttatgaattacccttgcgttatatgattaagcacggctttctggtaccaccggaa
cggctggatatgcccgtcgtacaatatgatttcagccgcttgaccagcaatagcgacggt
atgttccgtgaagtggatttagaccgcgagcttaagcagcagcaaagaattaccccacat
attgtcagtcagataatggagtatgccgcccatcgacggggggtgatgattttcgccgcc
accgttgagcatgccaaagaggtctatgggcttttgcctaaaggtgaggctgcgctggta
agtgccggaacgccgccagccgaacgggatgcgttaattaccgcgtttaaacagcagcaa
ttgcgctatttggtgaatgtcgcggtgctgaccactggttttgatgccccgtatgtcgat
ctgattgccattcttcgcccgaccgagtcagtcagtttatatcagcaaattgtggggcgc
gggctgcggctctctccgggcaaagaagattgtctgattctggattatgccggtaacccc
cataaccttttcactccggaagtgggtaccagcaaaccccacggtgatagccagccagtg
caggtcttttgcccggactgcggctttgccaatatcttctgggggaaatgcactgagtcc
ggcgagattattgaacactatggccgccgctgccagggctggtttgaagatgatcaaggt
gcgcaagcacaatgtgattaccgcttccgcttcaaatcctgcccacattgtagtgcagaa
aatgatattgctgctcgccgctgccatcagtgtcaggaggttctggtcgatcccgatgac
atgcttaaagctgcgttgaaattaaaggatgcgctggtactgcgttgtggcggaatgagc
ctggaagcgggtcaggatgcaaaaggtgagtggctaaaaatcacctattacgacgaagag
ggtaccaataccagtgagcgatttcgcttaaccactgccgcacaacgaatggcattcgag
caaattttccttcgtccgcaccaacgggctccgggtattgcgcttaaatggcaaactgcc
gcagatatcatcgcccagcaagcgctattgcgttatcccgattttgttgtcgcccgccgt
cgcggacaatggtggcaaatcagggaaaaggtttttgattatcagggccgttttagacgc
gctgattccctcgcctaa
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