Yersinia frederiksenii: AW19_1794
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Entry
AW19_1794 CDS
T03606
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yfr03400
]
AW19_1794
DNA repair and recombination proteins [BR:
yfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AW19_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
zf-tcix
AAA_30
AAA_16
zf-ribbon_3
zinc_ribbon_2
AAA_22
UPF0547
SLFN-g3_helicase
AAA
DZR
TniB
Motif
Other DBs
NCBI-ProteinID:
AJI88351
LinkDB
All DBs
Position
1943502..1945274
Genome browser
AA seq
590 aa
AA seq
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MAFTLRPYQQEAVDATLAYFRRHTEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLSLFDSAFSLLI
IDECHRISDADDSQYQQIIQHLRTTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDGK
SLFRDCIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREADLDRELKQQQ
RITPHIVSQIVEYAAHRRGVMIFAATVEHAKEVYGLLPKGQAALVSAGTPPAERDALITA
FKQQKLHYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILD
YAGNPHDLFTPEVGTSKPHTGSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWF
EDDDGARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLR
CGGMSLESGQDVKGEWLKITYYDEDGTDTSERFRLTTAAQRMAFEQVFLRPHQRAPGVTL
KWQTAADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYQGRFRRADSLA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacactacgcccttatcaacaagaagcggtggatgcgacgctagcttatttt
cgtcgccataccgaaccggcgctcattgtcttacccactggcgcaggtaaaagtctggtt
attgctgaattagcaaaactggcgcgtgggcgtgttttggtactagcgcatgtcaaagaa
ctggtggcgcaaaatcatgccaaatattgtgcttatggtttagaagcagacggtttagag
gccgatatttttgccgctggcctgcaacaacgccaaagtgaggggaaagtggtttttggc
agtgtgcaatccgtggcacggaatctgtcactgtttgatagtgccttttcgctgctcatt
atcgatgaatgtcatcgaatcagtgacgcagatgacagccaatatcagcaaattattcag
catttacgcacgactaacccgcgtttacgtttgctgggactgacggcgaccccttaccgc
ttgggcaaaggctggatttaccaattccactatcacggtatcactcgaggtgatgggaaa
tccctattccgcgattgtatttatgaattgcccctgcgttatatgattaagcacggtttt
ctggtgccaccggagcggctggatatgccggtcgtgcaatatgatttcagtcggttgacc
agcaatagcgacggcatgttccgtgaagcggatttagaccgcgagcttaaacagcagcaa
agaatcaccccacatattgttagtcagatagttgaatatgccgcccatcgccgtggcgtg
atgatttttgccgccactgtcgaacatgccaaagaagtctacgggctactccccaaaggc
caggcggcgctggtgagtgccggaacgccccccgccgagcgggatgctttaatcactgct
tttaagcagcagaaattacattatttggtgaatgtggcggtcttaacgaccggttttgat
gccccacatgttgatttgattgcaattcttcgcccaaccgaatccgtcagcttgtatcaa
caaattgttgggcgcggcttgcggctctcgccgggcaaagaagattgtctgattctggat
tatgccggcaatccccacgaccttttcaccccagaagtgggtaccagcaaaccccacacc
ggcagccagccagtacaagtcttttgcccagactgcggttttgccaatattttctgggga
aaatgcaccgaatccggcgagattattgagcattatggccgccgctgtcagggctggttt
gaagatgatgatggcgcacgagcccaatgtgattaccgcttccgctttaaatcctgccca
cattgcggggcggaaaatgatattgccgcccgccgctgtcatcagtgtcaggaggtgctg
gtcgaccccgatgatatgctgaaagctgccctgaaattaaaggacgcgctggtattgcgt
tgcggtggaatgagtttggaaagtggccaggatgtaaaaggcgaatggctaaaaatcact
tattacgacgaagatggcaccgataccagtgagcgttttcgcttaactaccgccgcccag
cggatggcatttgagcaagttttcctgcgccctcatcaacgggcgcctggggttacactg
aaatggcaaactgccgccgatatcatcgctcagcaggcgctactgcgttatccggatttt
gtggtcgcccgccgccgtggacaatggtggcaaatcagggaaaaggttttcgattatcag
ggacgttttaggcgggctgactctctcgcctaa
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